Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01178 ATGAGCAAAAGGGTCATCACAGAGCTTGTTCTGGGTCTCGACTACGCAACTCAGCTCAAGTTTCTGCTTCAGAACCCTGTTGGCCCAGATGGGTCTGTTGCAGCTAAGGAACTTGTGACCAATGTGCAGAGATCTTTCGCTGAAACTCTCTCTTTGTTGACTTCTTCCGAGGCTGCAAGTGGTGAAGACGAGGTTGCTCAGAATCTCGTGATTTCCGGGGAAGATGCCTCGCAGGCTGCAAGCATTGAACTTAGGTCTGAGGATTCAACTGAGAGTAGAAAGAGATCGTTGCCCCTCTCAAAGGATCGCAGAGGTTCCTACAAAAGAAGGAAGACTGAACAGACATGGTCCATAGTTTCCCACACCACTGATGATAATCATGCATGGAGAAAGTACGGACAAAAGGATATTCTAAATTCTCAGTTTCCCAGGAGTTACTTCAGATGCACTAGGAAGTTTGAACAAGGTTGCAAAGCCATGAAACAGGTGCAACGGTTAGAAGAGAATCCTGATATGTACAATATTACGTATATTGGGTTTCACACATGCAACGACACCCTCAAGGCTCCACAAATGGTCACATATGAAACTTGGGACTCATTTCTTGAGAATTCCCACGCAGACTTAAATGTTCCAAATGAACAAAAGCAACACGATCCTCCTATCAGATCACAAAGCCCAATTGTTAAACAAGAATATCCCAATGATGAGAGTGATCCTACAGATGCTGACCTGTGGTCTGATTTGAAGGATTTTGAACTGTCCAATGAGAAGCCTGCCTTCAAAATAGTCTCTGAAAATGCAGATGCATTCATGTTCTGGCTCCCGGAGTTTGGACATGAATGTTGA 849 0.4441 MSKRVITELVLGLDYATQLKFLLQNPVGPDGSVAAKELVTNVQRSFAETLSLLTSSEAASGEDEVAQNLVISGEDASQAASIELRSEDSTESRKRSLPLSKDRRGSYKRRKTEQTWSIVSHTTDDNHAWRKYGQKDILNSQFPRSYFRCTRKFEQGCKAMKQVQRLEENPDMYNITYIGFHTCNDTLKAPQMVTYETWDSFLENSHADLNVPNEQKQHDPPIRSQSPIVKQEYPNDESDPTDADLWSDLKDFELSNEKPAFKIVSENADAFMFWLPEFGHEC* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01178 282 MobiDBLite consensus disorder prediction 81 113 - -
Phac9g01178 282 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g01178 282 ProSiteProfiles WRKY domain profile. 124 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g01178 282 MobiDBLite consensus disorder prediction 211 244 - -
Phac9g01178 282 MobiDBLite consensus disorder prediction 86 113 - -
Phac9g01178 282 Pfam WRKY DNA -binding domain 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g01178 282 SUPERFAMILY WRKY DNA-binding domain 120 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g01178 282 MobiDBLite consensus disorder prediction 211 232 - -
Phac9g01178 282 Gene3D WRKY domain 108 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g01178 282 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 34 207 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01178 Phac-Chr9 9407243 9410115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01178 4 223 WRKY Transcription Factor Family AT3G56400 42.411 5.10e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac9g01178 WRKY 2.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01178 - - vun:114164744 463.381