Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01175 ATGGCTGCACCTTCTTCTTCAAATTGGGTCATGGAAAGTGCTCATGATGTTCCTCATGTTTTGGCCGTTGATGACAACCTTATTGATCGAAAACTCGTTGAGAAACTCCTCAGGAATTCTTCTTGCAAAGTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAAGTGGTGGACAGAACAGCATGAACGGTAGATCCAAAGTAAATTTGGTAATCACAGACTATTGCATGCCAGGAATGACAGGCTATGAGCTACTTAAGAAAATTAAGGAATCATCTGTAATGAAGGAAGTTCCAGTAGTGATAATGTCTTCTGAGAACATACCAACACGGATTAACAAGTGTCTGGAAGAAGGAGCTCAGATGTTCATCTTAAAGCCCCTCAAACAATCTGATGTTAAAAAACTGACATGTCAGTTAATGAATTGA 444 0.4032 MAAPSSSNWVMESAHDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNSMNGRSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDVKKLTCQLMN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01175 147 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
Phac9g01175 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 145 IPR045279 GO:0009736
Phac9g01175 147 FunFam Two-component response regulator ORR5 18 147 - -
Phac9g01175 147 Pfam Response regulator receiver domain 20 140 IPR001789 GO:0000160
Phac9g01175 147 CDD REC_typeA_ARR 20 141 - -
Phac9g01175 147 SUPERFAMILY CheY-like 18 145 IPR011006 -
Phac9g01175 147 SMART REC_2 18 142 IPR001789 GO:0000160
Phac9g01175 147 Gene3D - 19 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01175 Phac-Chr9 9349017 9352089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01175 5 147 Response Regulator Gene Family AT3G56380 69.655 1.39e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac9g01175 Response_reg 2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01175 K14492 - gmx:100499827 276.944