Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01172 ATGCGAGCGTTATTTTCGAACATGAAAGGTTTTCTTTTACTTGTGTGGTTGTTGGAGGTGGTTTGTGTGGCGGTGGCGGCGGTGAACCCCTCTCTGAACGATGACGTTTTGGGGCTGATTGTGTTCAAGGCTGACATACGAGATCCAAAGGGGAAGCTTGCGTCTTGGAGCGAGGACGATGAGAGTGCGTGTGGGGCTGGTTGGGTTGGGGTGAAGTGCAACCCTAGATCCAACAGAGTGGTGGAGATTAACCTTGATGGGTTTTCTCTTTCTGGGAGAATAGGTCGAGGGTTGCAAAGGTTGCAGTTTCTAAGGAAGCTTTCTCTGGCGAACAACAACCTCACTGGGGGGATAAACTCCAACATTGCTCGAATAGATAGTCTTAGGGTCATCGACTTGAGTGGCAATAGTCTCTCAGGGCAGGTGTCCGATGATGTTTTCCGACAATGTGGGTCTCTCAGGGCTGTTTCCTTGGCTAGGAACAGGTTTTCTGGGTCCATTCCTTCTGCTTTGGGGGCGTGTTCTGCTCTTGCTGCTATAGACCTTTCTAATAACCAGTTTTCTGGTTCTGTACCCTCCGGGGTTTGGTCTTTGAGTGCTCTTAGGTCCTTGGATTTGTCTGATAACTTGTTGGAGGGAGAGATTCCTAAGGGGGTTGAGGCCATGAAGAATTTAAGGAGTGTTAGCTTGGCCAGGAATCGTTTAACTGGGAATGTTCCTGGTGGGTTTGGGAGCTGTTCGCTTTTGAGGTCCATTGATTTGGGGGATAATTCATTTTCTGGGAGTATTCCTGGTGATTTCAAGGAACTTGCATTGTGTGGTTACCTTAGTTTGCGAGGGAATGCTTTTTCTGGAGAGCTTCCTGAGTGGATTGGGGAGATGAGAGGTCTTGAGACGTTGGACCTTTCAAACAATGGGCTTACTGGTCGGGTTCCAAACTCTGTTGGAAATCTTCAGTCATTGAAGATGTTGAATTTTTCTGGGAATAGTTTCGGTGGTAGTCTTCCTGAGTCTATGGCTAATTGTACGAAACTTTTGGTGTTGGATGCCAGCCGAAATTCGATGTCCGGGGGGCTTCCATTGTGGATTTTCAAGTCAGATTTGGACAAGGTTTTGTTGTCGGAAAATGGCGCAAGTGGTAGCAAGAAAAGCCCTTTGATTTCCTTGGCTGAAGTTGCAGTTCAAAGTCTTCAAGTTTTGGATTTGTCTCACAATGCATTTTCTGGTGAAATCACATCTGCTATTGGAGGTTTAAGCAGCCTGCATGTTTTGAATTTAGCAAATAACTCTCTTAGAGGTCCTATACCAGCTGCAATTGGAGGAGCTGTGTCCTTGAAAGAACTGGTACTGAAAAAGAACTTCCTAATTGGGAAAATTCCAATGTCAATTGAGAACTGCACTTTGCTAACTACTCTGAGCCTATCCCAGAACTGGCTGAGTGGCCCTATACCTGCAGCAGTTGCAAAACTTACCAACCTGCAAACTGTGGACTTATCTTACAACAACCTTACTGGAAACCTTCCTAAGCAACTGGCCAACCTTGCCAATCTTCTTTCCTTCAATTTATCTCACAACAACCTTCAGGGTGAACTGCCGGCTGGTGGTTTTTTCAACACCATTTCGCCCACCTCTGTTTCTGGCAATCCATCACTTTGTGGAGCTGCAGTAAACAAATCATGCCCTGCTGTCCTCCCAAAGCCTATTGTTCTAAATCCCAACACTTCTACTGACGCAAGCCCGGGTGCATTGCCTCAAAATTTGGGTCACAAAAGAATCATTCTCAGCATTTCGGCACTCATTGCCATTGGTGCAGCTGCAGTCATTGTAATTGGTGTTATTAGCATCACTGTTCTCAATCTCCGTGTTCGGTCCTCCACATCACGAGATGCAGGTGCCCTCACATTTTCTGCAGGAGATGAATTCAGCCGTTCCCCTACTACGGATGCCAACTCTGGCAAGCTTGTGATGTTTTCTGGTGAGCCAGATTTCAGTTCTGGTGCGCATGCTTTGCTTAATAAGGACTGTGAGCTTGGGCGTGGAGGATTTGGTGCAGTGTACCAAACGGTTCTTAGAGATGGGCATTCAGTTGCAATAAAGAAGCTCACTGTATCAAGCCTTGTGAAGTCTCAAGAAGATTTTGAAAGAGAAGTAAAAAAGTTGGGAAAAATCAGACACCAAAACCTGGTGGAACTTGAGGGTTATTATTGGACTCCATCGCTGCAGCTTCTTATATACGAGTACGTCTCAGGTGGTAGTCTGTATAAGCACCTCCATGAAGGATCTGGTGGAAACTTCCTCTCATGGAATGAGAGATTTAATGTGATTCTGGGAACGGCCAAGGCCTTGGCACACTTGCACCAGTCCAACATTATTCACTATAACATAAAGTCAACCAATGTCCTTCTTGACAGTTATGGTGAAGCAAAGATAGGGGACTTTGGCCTAGCAAGGCTGTTACCAATGCTTGACCGATATGTGTTGAGCAGCAAAATTCAGAGTGCACTGGGATACATGGCACCGGAGTTTGCGTGCAAAACAGTGAAAATCACTGAGAAGTGTGATGTATATGGGTTTGGGATTCTGGTTTTGGAGATAGTGACAGGGAAGAGGCCAGTTGAATACATGGAGGATGATGTGGTGGTACTTTGTGACATGGTGAGAGGCGCTTTGGAAGAAGGTAGGGTGGAGGAATGCATTGATGAGAGGCTTGAAGGGAAATTCCCAGCAGAAGAAGCCATTCCTGTAATGAAGTTAGGCTTAATATGTACTTCTCAAGTGCCATCTAACAGGCCTGACATGGGAGAGGTAGTTAACATATTGGAGCTCATAAGATGTCCCTCTGAAGGACAAGAAGAATTGGGATGA 2865 0.459 MRALFSNMKGFLLLVWLLEVVCVAVAAVNPSLNDDVLGLIVFKADIRDPKGKLASWSEDDESACGAGWVGVKCNPRSNRVVEINLDGFSLSGRIGRGLQRLQFLRKLSLANNNLTGGINSNIARIDSLRVIDLSGNSLSGQVSDDVFRQCGSLRAVSLARNRFSGSIPSALGACSALAAIDLSNNQFSGSVPSGVWSLSALRSLDLSDNLLEGEIPKGVEAMKNLRSVSLARNRLTGNVPGGFGSCSLLRSIDLGDNSFSGSIPGDFKELALCGYLSLRGNAFSGELPEWIGEMRGLETLDLSNNGLTGRVPNSVGNLQSLKMLNFSGNSFGGSLPESMANCTKLLVLDASRNSMSGGLPLWIFKSDLDKVLLSENGASGSKKSPLISLAEVAVQSLQVLDLSHNAFSGEITSAIGGLSSLHVLNLANNSLRGPIPAAIGGAVSLKELVLKKNFLIGKIPMSIENCTLLTTLSLSQNWLSGPIPAAVAKLTNLQTVDLSYNNLTGNLPKQLANLANLLSFNLSHNNLQGELPAGGFFNTISPTSVSGNPSLCGAAVNKSCPAVLPKPIVLNPNTSTDASPGALPQNLGHKRIILSISALIAIGAAAVIVIGVISITVLNLRVRSSTSRDAGALTFSAGDEFSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLRDGHSVAIKKLTVSSLVKSQEDFEREVKKLGKIRHQNLVELEGYYWTPSLQLLIYEYVSGGSLYKHLHEGSGGNFLSWNERFNVILGTAKALAHLHQSNIIHYNIKSTNVLLDSYGEAKIGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGILVLEIVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEECIDERLEGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01172 954 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Phac9g01172 954 PRINTS Leucine-rich repeat signature 297 310 - -
Phac9g01172 954 PRINTS Leucine-rich repeat signature 490 503 - -
Phac9g01172 954 CDD STKc_IRAK 677 943 - -
Phac9g01172 954 SUPERFAMILY Protein kinase-like (PK-like) 675 938 IPR011009 -
Phac9g01172 954 Pfam Leucine rich repeat 396 453 IPR001611 GO:0005515
Phac9g01172 954 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Phac9g01172 954 Pfam Leucine rich repeat 295 354 IPR001611 GO:0005515
Phac9g01172 954 Pfam Leucine rich repeat 469 527 IPR001611 GO:0005515
Phac9g01172 954 Pfam Leucine rich repeat 224 282 IPR001611 GO:0005515
Phac9g01172 954 ProSitePatterns Protein kinases ATP-binding region signature. 677 700 IPR017441 GO:0005524
Phac9g01172 954 Gene3D Transferase(Phosphotransferase) domain 1 748 952 - -
Phac9g01172 954 Pfam Protein tyrosine and serine/threonine kinase 673 939 IPR001245 GO:0004672|GO:0006468
Phac9g01172 954 SUPERFAMILY L domain-like 80 188 - -
Phac9g01172 954 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 665 747 - -
Phac9g01172 954 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 371 563 - -
Phac9g01172 954 Gene3D Ribonuclease Inhibitor 314 564 IPR032675 -
Phac9g01172 954 Gene3D Ribonuclease Inhibitor 33 313 IPR032675 -
Phac9g01172 954 SUPERFAMILY L domain-like 159 533 - -
Phac9g01172 954 ProSiteProfiles Protein kinase domain profile. 671 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01172 954 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 748 949 - -
Phac9g01172 954 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 33 313 - -
Phac9g01172 954 Gene3D Phosphorylase Kinase; domain 1 665 747 - -
Phac9g01172 954 SMART LRR_typ_2 294 317 IPR003591 -
Phac9g01172 954 SMART LRR_typ_2 514 538 IPR003591 -
Phac9g01172 954 SMART LRR_typ_2 222 245 IPR003591 -
Phac9g01172 954 SMART LRR_typ_2 490 513 IPR003591 -
Phac9g01172 954 SMART LRR_typ_2 418 442 IPR003591 -
Phac9g01172 954 SMART LRR_typ_2 198 221 IPR003591 -
Phac9g01172 954 SMART LRR_typ_2 318 342 IPR003591 -
Phac9g01172 954 SMART LRR_typ_2 125 149 IPR003591 -
Phac9g01172 954 SMART LRR_typ_2 394 417 IPR003591 -
Phac9g01172 954 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01172 Phac-Chr9 9274942 9279075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01172 8 954 Receptor kinase-like Gene Family AT3G56370 65.916 0.0 1236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Phac9g01172 PK_Tyr_Ser-Thr 4.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01172 - - gmx:100791629 1658.66