Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01169 ATGAAGTATTGTGAGAAAAAGAGTGTTGTTCCTCATCAAAATCAAGGTTCAAATTCTAACACTAGAGTGTTGGTTGATTTCATGAAGATGTCAAAGGATGGTGACATTACTCAAGCATCATCAGATGAGAAGGTAATTGATTCATCTATTTCTCACTCAAAAGGTACAGCAAAGAAGAACACAAAGGTAGAAAAAACAAAGATTTTTTCTTGCAATTATTGCAACAAAGAGTTTTCTACCTCACAAGCTTTGGGAGGACACCAAAATGCACACAAACAAGAACGCGTTGTTGCAAAACATTGTCAAGGTTTTGATGTTAGAGGATTAACACAATTTCCTTATTACCCATATTATTCAAGTTTTTACAACTCTCATTCCCTCCATGGAAGATCCTTCAATGAGGCGCTTGGAATTCGAAGTGACTCCATGATTCACAAGCTTCCTAGGACTTCAAGAAATATGAAAAATGATTATCCAATTATAAAGAGTGATGCAACTCTTAGTTTGAAGTTGGAAGATGACAATGATAGAATCAATCTTGAAACACTTTCTCTTTTTACAAATGATGCTACCACTTCATCAAGCCAACTTAGAAAGATGACTACTCTTCCAACAACACAAATCGTTGATCATTATCTTCCAAGAGAAATTTCCAATGAACCATATTGCAATCTTGATTTGTCATTGAAACTTTAA 696 0.3448 MKYCEKKSVVPHQNQGSNSNTRVLVDFMKMSKDGDITQASSDEKVIDSSISHSKGTAKKNTKVEKTKIFSCNYCNKEFSTSQALGGHQNAHKQERVVAKHCQGFDVRGLTQFPYYPYYSSFYNSHSLHGRSFNEALGIRSDSMIHKLPRTSRNMKNDYPIIKSDATLSLKLEDDNDRINLETLSLFTNDATTSSSQLRKMTTLPTTQIVDHYLPREISNEPYCNLDLSLKL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01169 231 Pfam C2H2-type zinc finger 69 93 - -
Phac9g01169 231 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Phac9g01169 231 Gene3D Classic Zinc Finger 42 105 - -
Phac9g01169 231 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
Phac9g01169 231 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 9 231 IPR044246 GO:0009788
Phac9g01169 231 SUPERFAMILY beta-beta-alpha zinc fingers 66 97 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01169 Phac-Chr9 9238872 9239624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01169 67 231 C2H2 Transcription Factor Family AT5G10970 32.044 9.00e-16 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac9g01169 zf-C2H2_6 2.5e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01169 - - pvu:PHAVU_009G043700g 375.555