Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01168 ATGTCCTCCGAAGACATCACCCTCGTCCCCGACCAGAGGATCGAGAACGGTCTCACCTCCCCTCTTGTCTTCCAAGACGACCCTCTCCGCTTCAATTGCCCCACACCGCAGCATCGGGTCGGGGACCCGGGTCCCAAAACCCGCGAACTCGGCGCCTTCATCGACGAGAAGATGTTTATCGACCGCGGCCGCTTCTTTGCCGCCCAGAACCCCGACTTCCGTCGCTACGCCGACTGCTCCTCCCGCCAAGACCCCCGCAATTGGACCGTCAACGGCACCGCCGCCACTCCCAGCGGGGACGACGATTCTGACGAGGACGATGAAGATGACGACGAGGACGATGACGACGAAGGCGATACCGAAGTTGAAGGACTCGTTGGTGGTGGAAGCAAAAGCGAAATTATCGCTAACAACAACGGTAGCGGTGGTAATTTGCCTTCTGTTTCAAACGGGAAAGCTCATACTTTTGTTTCTGGGAGAGATCTGTTGGGGAAGGATGGTGGAGAGATTGGGCAGTTGGTGCTTAGCAATGTAAGTGGTGGTGGTGATGAAGATCAACGGCAAGAGGGGTTAGGTAAGTCTCAAAATTCTGTTACCGTTGCTGAAACTGACTGTGAGGAGTACTATTCGCATTATCTTCAAGGTGCTGACGGGGCTTCTGGCCACAAAGTTATGGTGGATAGTGGTTGTGGGTTTAGTGGGAGAAAGGATGCGATGTATTCCACCGAGTCAGGGGAATCACTCAGAAATATTCTTTCAGATCCCGTTACTGGAGCTCTTATGGATGACGCTATGATATTACCGTGTGGACATTCATTTAGCGGAGGTGGAATACAGCAGGTTCTTAGAATGAAAGCTTGCTGCACCTGTTCTCAACCCACAACCGAGGAATCAATATCTCCAAACCTATCACTTCGAGCTGCTGTGCAGGCATATCGTCGGGAAGAGGAGTCTCAATTCTACCGGTCACCTAAAAGAAGAAGAGAGAGATTTGATCAGGGTGGATTTGGAGATTCATCTGTTATGGAACCATCAAGGAGTAGAGGTGTTCAGTTTCCGTTTGCTGTTATGGACCGGGTTGTCATAAAGGGAAACAAAAGGACTCCAGAACGCTTTGTTGGGCGTGAAGCGATTGTAACAACGCAATGCCTGAATGGATGGTATGTGGTGAAGACATTGGACAATGCAGAGAGTGTAAAGTTGCAGTATCGATCTCTTGCTAAGGTTTTGGATGATCCTTCAAAGCCTGCCTCCAGCAAGATGTCACCTAATTGGCTTTAG 1281 0.5059 MSSEDITLVPDQRIENGLTSPLVFQDDPLRFNCPTPQHRVGDPGPKTRELGAFIDEKMFIDRGRFFAAQNPDFRRYADCSSRQDPRNWTVNGTAATPSGDDDSDEDDEDDDEDDDDEGDTEVEGLVGGGSKSEIIANNNGSGGNLPSVSNGKAHTFVSGRDLLGKDGGEIGQLVLSNVSGGGDEDQRQEGLGKSQNSVTVAETDCEEYYSHYLQGADGASGHKVMVDSGCGFSGRKDAMYSTESGESLRNILSDPVTGALMDDAMILPCGHSFSGGGIQQVLRMKACCTCSQPTTEESISPNLSLRAAVQAYRREEESQFYRSPKRRRERFDQGGFGDSSVMEPSRSRGVQFPFAVMDRVVIKGNKRTPERFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDDPSKPASSKMSPNWL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01168 426 Pfam U-box domain 252 317 IPR003613 GO:0004842|GO:0016567
Phac9g01168 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 317 IPR013083 -
Phac9g01168 426 MobiDBLite consensus disorder prediction 323 344 - -
Phac9g01168 426 MobiDBLite consensus disorder prediction 82 98 - -
Phac9g01168 426 MobiDBLite consensus disorder prediction 77 149 - -
Phac9g01168 426 ProSiteProfiles U-box domain profile. 247 319 IPR003613 GO:0004842|GO:0016567
Phac9g01168 426 MobiDBLite consensus disorder prediction 132 149 - -
Phac9g01168 426 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 15 421 - -
Phac9g01168 426 MobiDBLite consensus disorder prediction 99 122 - -
Phac9g01168 426 MobiDBLite consensus disorder prediction 176 198 - -
Phac9g01168 426 SUPERFAMILY RING/U-box 247 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01168 Phac-Chr9 9222676 9227695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01168 194 426 Plant U-box Gene Family AT5G05230 59.917 2.57e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01168 - - gmx:100786717 692.96