Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01135 ATGGGAAGCGTTGGAAATATTTGGTTTCATTCAGTGCAGAAAGTTCCTTTGGATACGCAACTACAGAACAAATCATTATGCGGATATATAGTTCCTCCTTATCTTAACTACCCTATGAGGCTCACTCCAATATCTTGTGAACTGTCAGAAAGTGGGATTCAGGAGAACTCCAGCAGCAAAAGCAAGAGGCTTTACAAGAACAAGAACAAGAACAGGATGGAGGAGTACAACATGGCTATGAAGAGAATGATGAGGAACCCTTATGAATATCACCATGATCTGGGTATGAATTATACTCTTATAACCGACTACTTGATTGTGGGCTCTCAACCGCAGAAACCCGAAGACATAGATCACCTAAAAAACGAAGAGGGTGTGGCATACATTCTAAATTTGCAACAGGATAAGGATGTTGATTACTGGGGAATAGATTTACAGTCAATAAGAAAAAGGTGTCATGAACTTGAAATTATCCACACGAGGAGACCGGCAAGAGACTTTGATCCAGTGTCCTTGCGAAGTGAACTACCTAAAGCAGTTGCATCCTTAGAATGGGCAATTTCTGAGGGGAAAGGAAGAGTTTATGTACACTGTACTGCAGGGCTTGGAAGAGCTCCAGCGGTGGCAATTGCTTATTTGTTCTGGTTTTGTGACATGAATCTAAATGAAGCGTACGATATGCTAACTTCAAAGAGACCTTGTGGACCAAATAAAACAGCAATACGTGGAGCTACGTATGAGTTGGCTAAGAATGATCCATTCAAGGAGCCATTTGAGAATCTTCCAGAATATGCATTTGAGGATGTAGCAGAGTGGGAAAGAAACTTGATTCAAAATCGTGTTCGCTCCCTTCGTGAAACTTGA 864 0.4132 MGSVGNIWFHSVQKVPLDTQLQNKSLCGYIVPPYLNYPMRLTPISCELSESGIQENSSSKSKRLYKNKNKNRMEEYNMAMKRMMRNPYEYHHDLGMNYTLITDYLIVGSQPQKPEDIDHLKNEEGVAYILNLQQDKDVDYWGIDLQSIRKRCHELEIIHTRRPARDFDPVSLRSELPKAVASLEWAISEGKGRVYVHCTAGLGRAPAVAIAYLFWFCDMNLNEAYDMLTSKRPCGPNKTAIRGATYELAKNDPFKEPFENLPEYAFEDVAEWERNLIQNRVRSLRET* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01135 287 Gene3D Protein tyrosine phosphatase superfamily 80 287 IPR029021 -
Phac9g01135 287 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 52 253 - -
Phac9g01135 287 Pfam Dual specificity phosphatase, catalytic domain 118 237 IPR000340 GO:0008138|GO:0016311
Phac9g01135 287 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 254 IPR020422 GO:0006470|GO:0008138
Phac9g01135 287 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 174 233 IPR000387 GO:0016311|GO:0016791
Phac9g01135 287 SMART dsp_5 97 239 IPR020422 GO:0006470|GO:0008138
Phac9g01135 287 Coils Coil 66 86 - -
Phac9g01135 287 CDD DSP_laforin-like 96 243 IPR045204 GO:0019203
Phac9g01135 287 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 94 239 IPR029021 -
Phac9g01135 287 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 80 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01135 Phac-Chr9 8960024 8963918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01135 35 287 Protein tyrosine phosphatase (PTP) family AT3G10940 72.727 9.13e-140 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01135 - - gmx:100787079 469.929