Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01130 ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTTTCTTCTCAAATGGGAAGAAGACATATGTTAGGCCCTCCTGGAACCCTAAATACCATCACCCCTTGTGCGGCATGTAAGTTGTTGAGAAGAAGATGTGCCCAAGAATGTCCCTTTTCTCCATATTTCTCTCCTCATGAGCCTCAAAAGTTTGCTTCCGTCCACAAAGTTTTTGGTGCCAGCAACGTCTCAAAGATGCTCATGGAAGTACCAGAGTGTCAGAGAGCTGATGCAGCAAATAGTCTAGTTTATGAGGCCAATGTGAGGCTAAGAGATCCTGTGTATGGATGCATGGGTGCAATTTCTGCTTTGCAACAACAAGTTCAATCTTTACAAGCTGAACTTAGTTTAGTGAGGGCTGAAATACTTAAATACAAACTCAGGGAAGCTCACATGATTCCCTCCTCTCATCATGTTGCAATGCTTCCTTCAGCTGGGGCTGTTTCAATCGCTGCTCCACCTCCACCACCTCCTCCACCACCACCACTTCCACCTCCTTCTATTCCTCAAACTTCTTCCTCTTCTTCCATGTACATCCAACAGACTGATCCCACCACTTACACCACAATTTCAAGTGATAATATCTCCTATTTTGGTTAA 660 0.4439 MSRERERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELSLVRAEILKYKLREAHMIPSSHHVAMLPSAGAVSIAAPPPPPPPPPPLPPPSIPQTSSSSSMYIQQTDPTTYTTISSDNISYFG* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01130 219 MobiDBLite consensus disorder prediction 170 189 - -
Phac9g01130 219 MobiDBLite consensus disorder prediction 170 213 - -
Phac9g01130 219 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Phac9g01130 219 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Phac9g01130 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 184 - -
Phac9g01130 219 Coils Coil 121 148 - -
Phac9g01130 219 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01130 Phac-Chr9 8851900 8854209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01130 27 219 AS2 family AT2G40470 71.939 3.57e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac9g01130 LOB 1.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01130 - - gmx:100790799 362.073