Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01112 ATGGACTTGGCCGCGAAGCTTCATCACTTAGACCTCACCGGCGCGGTCATTTTAGATACACGAAAGCCCTCCGTGCTACGCCACCTTCCGCCACGCGTCACCACCAGAGCGAACACCAACAACACTAACATCAGCACCAATCTAATTTACACCAGCCGCTTCTCGGGCCCATTGCGGCCCAATTCCGCTTCCTCCTCGGGCGTAACAACTGTAACCGTCGACGACGACATCGAGTCTCTCTTCTCCGAAACCGTCTCGGAAGAGCCGCGGCGCGGGAGGAAGCAGCAGAGTGGAGGCGCGTCGGGCGTGTCGTCGGGGGTGAAGCTGGAAAACGTGGGGAAGGCGTACAAGGGCGTGACAGTGTTGAAGGACGTGAGTTGGGAGGTGAAGAAGGGGGAGAAGGTGGGTTTGGTTGGCGTGAACGGCGCGGGGAAGACGACGCAGATGAGGATTATCGCTGGATTGGAGGAGCCGGACTACGGGAACGTGATAAAGGCGAAGCCGAACATGAAAATCGCGTTTCTGAATCAGGAGTTCGAGGTCTCGCTGAGCAGGACGGTGAGGGAGGAGTTCATGAGCGCGTTCAAGGAGGAAATGGAGGTGGCGGGGAAGTTGGAGAGGGTGCAGAAGGCGCTCGAGGGTGCTGTCAACGATTTGGAGTTGATGGGAAGGCTTTTGGATGAGTTTGATTTGCTTCAGCGGAGGGCTCAGTCTGTGGACCTCGATGAGGTTGATGCGAAAATAAATAAGTTGGTGCCTGAACTTGGTTTTGCTCCTGAGGATTCTGATAGGTTGGTTGCGTCTTTCAGTGGAGGCTGGCAGATGAGAATGTGTCTTGGAAAGATTCTACTCCAGGATCCTGATTTGTTGCTGTTAGATGAGCCTACAAATCACCTTGATCTTGACACCATTGAGTGGCTTGAGGAGTATCTTAACCAGCAGGATGTGCCGATGGTTATCATTTCCCATGACCGAGCTTTCCTTGATCAACTGTGTACAAAAATTGTGGAAACTGACATGGGTGTGTCCAGGACGTTTGAGGGAAATTATTCGCAGTACATAATTTCAAAAGCAGCATGGATTGAGGCACAGTATGCTGCTTGGGAGAAGCAGCAGAAAGAAATTGAGCAGACAAGAGACTTGATCAGTAGATTAAGTGCTGGAGCAAATTCTGGCCGTGCTTCGTCTGCTGGAAAGAAGCTGGAGAGACTCCAGGAAGAGGAACTGGTGGAGAAGCCATTTGAACGCAAACAGATGAAAATCAGGTTCCCTGAGCGTGGACAGAGTGGAAGATCTGTTGTAACAATTAAGAACTTGGAATTTGGCTTTGAGGATAAGCCACTTTTCAAAAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTTCTTTACTGAAATTGATTATGGGTTTGGAAAAGCCAACCGGGGGTGAAGTTTTGCTTGGGGAGCATAATGTGTTACCTAATTATTTTGAGCAGAATCAGGCTGAGGCACTTGATCTAGACAAGACAGTGCTTGAGACAGTAGAGGAAGCAGCAGAGGACTGGAGGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGACCGAAAAGTTTCACTATTGAGTGGTGGTGAGAAGGCACGGCTGGCTTTTTGCAAGTTCATGGTAAAACCATCCACTCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAGTGAATACGAGGGCACTGTTATCACAGTATCTCATGACAGATACTTCATAAAGCAAATAGTTAACAGGGTCATAGAAATTAAAGATGGCACTATACAGGATTATGCAGGTGATTACAATGTAAGTTAA 1914 0.4807 MDLAAKLHHLDLTGAVILDTRKPSVLRHLPPRVTTRANTNNTNISTNLIYTSRFSGPLRPNSASSSGVTTVTVDDDIESLFSETVSEEPRRGRKQQSGGASGVSSGVKLENVGKAYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDYGNVIKAKPNMKIAFLNQEFEVSLSRTVREEFMSAFKEEMEVAGKLERVQKALEGAVNDLELMGRLLDEFDLLQRRAQSVDLDEVDAKINKLVPELGFAPEDSDRLVASFSGGWQMRMCLGKILLQDPDLLLLDEPTNHLDLDTIEWLEEYLNQQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYIISKAAWIEAQYAAWEKQQKEIEQTRDLISRLSAGANSGRASSAGKKLERLQEEELVEKPFERKQMKIRFPERGQSGRSVVTIKNLEFGFEDKPLFKKANLTIERGEKIAIIGPNGCGKSSLLKLIMGLEKPTGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVITVSHDRYFIKQIVNRVIEIKDGTIQDYAGDYNVS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01112 637 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524|GO:0016887
Phac9g01112 637 Pfam ABC transporter 122 297 IPR003439 GO:0005524
Phac9g01112 637 CDD ABCF_EF-3 434 626 - -
Phac9g01112 637 CDD ABCF_EF-3 108 337 - -
Phac9g01112 637 FunFam ABC transporter ATP-binding protein 394 637 - -
Phac9g01112 637 Gene3D - 397 637 IPR027417 -
Phac9g01112 637 MobiDBLite consensus disorder prediction 82 105 - -
Phac9g01112 637 SMART AAA_5 131 346 IPR003593 GO:0016887
Phac9g01112 637 SMART AAA_5 458 626 IPR003593 GO:0016887
Phac9g01112 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 434 636 IPR003439 GO:0005524
Phac9g01112 637 Pfam ABC transporter 450 581 IPR003439 GO:0005524
Phac9g01112 637 ProSitePatterns ABC transporters family signature. 269 283 IPR017871 GO:0005524|GO:0016887
Phac9g01112 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 107 365 IPR003439 GO:0005524
Phac9g01112 637 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 106 635 - -
Phac9g01112 637 Pfam ABC transporter 336 423 IPR032781 -
Phac9g01112 637 Gene3D - 104 390 IPR027417 -
Phac9g01112 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 353 IPR027417 -
Phac9g01112 637 FunFam Putative ABC transporter ATP-binding component 106 392 - -
Phac9g01112 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 633 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01112 Phac-Chr9 8688695 8694454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01112 431 629 Calmodulin-binding Proteins AT2G36910 26.126 2.35e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01112 - - vum:124829475 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01112 9 8688695 8694454 Phac9g01112 9 8688695 8694454 ECH