Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01111 ATGGACTTGGCCGCGAAGCTTCATCACTTAGACCTCACCGGCGCGGTCATTTTAGATACACGAAAGCCCTCCGTGCTACGCCACCTTCCGCCACGCGTCACCACCAGAGCGAACACCAACAACACTAACATCAGCACCAATCTAATTTACACCAGCCGCTTCTCGGGCCCATTGCGGCCCAATTCCGCTTCCTCCTCGGGCGTAACAACTGTAACCGTCGACGACGACATCGAGTCTCTCTTCTCCGAAACCGTCTCGGAAGAGCCGCGGCGCGGGAGGAAGCAGCAGAGTGGAGGCGCGTCGGGCGTGTCGTCGGGGGTGAAGCTGGAAAACGTGGGGAAGGCGTACAAGGGCGTGACAGTGTTGAAGGACGTGAGTTGGGAGGTGAAGAAGGGGGAGAAGGTGGGTTTGGTTGGCGTGAACGGCGCGGGGAAGACGACGCAGATGAGGATTATCGCTGGATTGGAGGAGCCGGACTACGGGAACGTGATAAAGGCGAAGCCGAACATGAAAATCGCGTTTCTGAATCAGGAGTTCGAGGTCTCGCTGAGCAGGACGGTGAGGGAGGAGTTCATGAGCGCGTTCAAGGAGGAAATGGAGGTGGCGGGGAAGTTGGAGAGGGTGCAGAAGGCGCTCGAGGGTGCTGTCAACGATTTGGAGTTGATGGGAAGGCTTTTGGATGAGTTTGATTTGCTTCAGCGGAGGGCTCAGTCTGTGGACCTCGATGAGGTTGATGCGAAAATAAATAAGTTGGTGCCTGAACTTGGTTTTGCTCCTGAGGATTCTGATAGGTTGGTTGCGTCTTTCAGTGGAGGCTGGCAGATGAGAATGTGTCTTGGAAAGATTCTACTCCAGGATCCTGATTTGTTGCTGTTAGATGAGCCTACAAATCACCTTGATCTTGACACCATTGAGTGGCTTGAGGAGTATCTTAACCAGCAGGATGTGCCGATGGTTATCATTTCCCATGACCGAGCTTTCCTTGATCAACTGTGTACAAAAATTGTGGAAACTGACATGGGTGTGTCCAGGACGTTTGAGGGAAATTATTCGCAGTACATAATTTCAAAAGCAGCATGGATTGAGGCACAGTATGCTGCTTGGGAGAAGCAGCAGAAAGAAATTGAGCAGACAAGAGACTTGATCAGTAGATTAAGTGCTGGAGCAAATTCTGGCCGTGCTTCGTCTGCTGGAAAGAAGCTGGAGAGACTCCAGGAAGAGGAACTGGTGGAGAAGCCATTTGAACGCAAACAGATGAAAATCAGGTTCCCTGAGCGTGGACAGAGTGGAAGATCTGTTGTAACAATTAAGAACTTGGAATTTGGCTTTGAGGATAAGCCACTTTTCAAAAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTTCTTTACTGAAATTGATTATGGGTTTGGAAAAGCCAACCGGGGGTGAAGTTTTGCTTGGGGAGCATAATGTGTTACCTAATTATTTTGAGCAGAATCAGGCTGAGGCACTTGATCTAGACAAGACAGTGCTTGAGACAGTAGAGGAAGCAGCAGAGGACTGGAGGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGACCGAAAAGTTTCACTATTGAGTGGTGGTGAGAAGGCACGGCTGGCTTTTTGCAAGTTCATGGTAAAACCATCCACTCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAGTGAATACGAGGGCACTGTTATCACAGTATCTCATGACAGATACTTCATAAAGCAAATAGTTAACAGGGTCATAGAAATTAAAGATGGCACTATACAGGATTATGCAGGTGATTACAATTATTATTTAGAGAAGAATCTTGATGCTAGGGAAAGAGAACTTGAACGCGAGGCAGAACTTGATAGCAAAGCTCCTAAAGTGAAAGCCAAATCCAAGATGTCTAAGGCTGAGAAAGAAGCACGGAAGAAGCAAAAGGTGCAAGCCTTTCAGGCAGCAAAACAGAAGTCTAAAGGTGTGAAAAATGCGAAGAGATGGAATTGA 2106 0.4753 MDLAAKLHHLDLTGAVILDTRKPSVLRHLPPRVTTRANTNNTNISTNLIYTSRFSGPLRPNSASSSGVTTVTVDDDIESLFSETVSEEPRRGRKQQSGGASGVSSGVKLENVGKAYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDYGNVIKAKPNMKIAFLNQEFEVSLSRTVREEFMSAFKEEMEVAGKLERVQKALEGAVNDLELMGRLLDEFDLLQRRAQSVDLDEVDAKINKLVPELGFAPEDSDRLVASFSGGWQMRMCLGKILLQDPDLLLLDEPTNHLDLDTIEWLEEYLNQQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYIISKAAWIEAQYAAWEKQQKEIEQTRDLISRLSAGANSGRASSAGKKLERLQEEELVEKPFERKQMKIRFPERGQSGRSVVTIKNLEFGFEDKPLFKKANLTIERGEKIAIIGPNGCGKSSLLKLIMGLEKPTGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVITVSHDRYFIKQIVNRVIEIKDGTIQDYAGDYNYYLEKNLDARERELEREAELDSKAPKVKAKSKMSKAEKEARKKQKVQAFQAAKQKSKGVKNAKRWN* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01111 701 Pfam ABC transporter 450 581 IPR003439 GO:0005524
Phac9g01111 701 FunFam Putative ABC transporter ATP-binding component 106 392 - -
Phac9g01111 701 MobiDBLite consensus disorder prediction 651 701 - -
Phac9g01111 701 ProSitePatterns ABC transporters family signature. 553 567 IPR017871 GO:0005524|GO:0016887
Phac9g01111 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 434 649 IPR003439 GO:0005524
Phac9g01111 701 CDD ABCF_EF-3 434 626 - -
Phac9g01111 701 CDD ABCF_EF-3 108 337 - -
Phac9g01111 701 Gene3D - 397 662 IPR027417 -
Phac9g01111 701 Pfam ABC transporter 122 297 IPR003439 GO:0005524
Phac9g01111 701 Coils Coil 661 681 - -
Phac9g01111 701 FunFam ABC transporter ATP-binding protein 394 662 - -
Phac9g01111 701 MobiDBLite consensus disorder prediction 82 105 - -
Phac9g01111 701 SMART AAA_5 131 346 IPR003593 GO:0016887
Phac9g01111 701 SMART AAA_5 458 626 IPR003593 GO:0016887
Phac9g01111 701 ProSitePatterns ABC transporters family signature. 269 283 IPR017871 GO:0005524|GO:0016887
Phac9g01111 701 Pfam ABC transporter 336 423 IPR032781 -
Phac9g01111 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 639 IPR027417 -
Phac9g01111 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 353 IPR027417 -
Phac9g01111 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 107 365 IPR003439 GO:0005524
Phac9g01111 701 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 106 692 - -
Phac9g01111 701 Gene3D - 104 390 IPR027417 -
Phac9g01111 701 MobiDBLite consensus disorder prediction 651 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01111 Phac-Chr9 8688695 8694454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01111 431 651 Calmodulin-binding Proteins AT2G36910 26.316 2.39e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01111 - - gmx:100796907 1189.1