Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01101 ATGAAAGCCCTGTACAGAGGCTCTCTCTTTCTTAAATTCTTCATCACCTTACTTTTCATTGGGAGAGCTTCTTCTTCTCTACTTCCCACCAGAGACCCTTCTCAGCAACTCCTCAGCTTCAAAGCTTCTCTTCCCAACCCATCTCTGCTCCCCAACTGGCTCCCCAACCAAACCCCCTGTTCCTTCACCGGCATCACCTGCAACCAGACCCACCTCACTTCCATAGACCTCACCTCCATCCCTCTCAGTACCAACTTCTCCATTGTAGCCACCTACCTCCTCACCCTCGACCACCTCCAGTCCATCTCCCTCAAATCCACCAACCTTACCGGCCCTTCCACCATTCCACTCTCTCATTCTAAGTGCACCTCCTCCCTAACCACCATAGATCTGTCCCAGAACACTCTCTCCGGTTCCCTCAGCGACATGTCCTTTCTTGCATCCTGTTCAAACCTTCAATCTCTCAACCTTTCTAGTAACCTTCTCGAATTCAACTCCTCGCACTGGAAACTCAACCTCCGCATCGCAGACCTCTCCAACAACAAGATTTCCGGTCCCGGCATCCTGCTCTGGCTTCTCAACCCCGACATCGAACACCTGGCGCTCAAAGGTAACAAAATCACTGGAGATACCGACTTCTCCGGTTCCACTTCTCTGCAGCACTTGGACCTTTCCTCCAACAACTTCTCGGTAGCTATTCCTTCCTTGGGCGAGTGTTCCTCGCTAAAATACTTGGACCTGTCTGCCAACAAATACTTGGGCGACATTGCACGCACTCTCTCCCCTTGCAAGACTCTCGTCTACCTCAACGTCTCCAGTAACCAGTTCTCCGGTCAGGTTCCTTCCCTCCCTCTTGGTTCTCTCCAGTACGTCTACCTTGCTGCCAACCATTTCCATGGCCCAATTCCTCCTGCACTCGCAGACCTCTGCTCCACTCTCCTCCAGCTGGATCTCTCTTCCAACAATCTCACTGGTGACTTCCCACGCGCCTTTGGCGCGTGCTCTTCCCTTCAATCCTTGGACATCTCGAGCAACCTCTTCTCCGGTGCGTTGCCCATGGAGGTTCTGACTCAAATGAGCAGTCTGAGGGAGCTTGCGGTGGCTTTCAACGAGTTTGGCGGTCCTCTCCCGGTGTCACTGTCGAAGCTTTCCAGTTTGGAATTGCTGGATCTGAGTTCCAACAACTTCAGCGGACCAATCCCTGGAACGCTGTGTGGAGATGCTGGGAATAACTTAAAGGAACTTTACCTGCAGAATAACCGGTTCATGGGTTTTATTCCTCCCACGCTCAGCAACTGTTCCAACCTTGTTGCCTTGGACTTGAGCTTCAACTTTCTGACGGGGACCATCCCTCCAAGTCTAGGGTCGCTCTCGAAGCTTCGGGACCTGATTATCTGGCTCAACCAGCTCCACGGTGAGATACCTCAGGAGCTGATGTATCTGAAGAACTTAGAGAATCTTATCCTGGATTTCAATGAGTTGAGTGGGAACATTCCCTCTGGCATCGTTAACTGTACCAAGCTCAATTGGATCTCCCTCTCCAACAACAGGCTAAGCGGCGAGATACCAGCTTGGATTGGGAAGCTTTCCAATCTGGCCATACTCAAACTCAGTAATAACTCCTTCTCCGGTCGTATTCCTCCGGAGCTTGGCGATTGCACTAGTCTGATATGGTTGGATCTGAATACTAACTCACTAACGGGGCCCATTCCGCCTGAGCTGTCCAAGCAGTCTGGGAATATCGCCGTGAATTTCATCAATGGAAAGACTTATGTGTACATAAAGAACGATGGGAGTAAAGAGTGTCATGGAGCCGGGAACTTGCTGGAGTTTGCGGGGATCAGTCAGCAGCAGCTCAACCGGATTTCCACCAAGAACCCCTGCAATTTCACCAGGGTTTATGGAGGTAAGTTGCAGCCAACATTTAACCATAATGGTTCTATGATATTTTTGGATATCTCCCACAACATGTTGTCAGGCAGTATTCCGAAGGAACTTGGGGTCATGTACTATTTGACCATTCTCAATCTGGGACACAATAATGTGTCTGGGAGCATTCCTCAGGAGCTTGGGAAGATGAAGAATCTCAACATTCTTGATCTCTCCAATAATAGACTGGAAGGACAAATCCCGCAGAGTCTTACCGGACTCTCCTTGCTCACTGAGATTGACTTGTCCAACAACATGCTTTCCGGAACTATTCCTGAGACTGGTCAATTTGATACTTTCCCTGCGGCGAGGTTCCAGAACAATTCTGGTCTCTGTGGTGTTCCTCTGTCTCCATGTGGGTCGGACCCCGCAAACAGTGGGAGTGCACAGCATATGAAGTCTCACCGGGGTCAGGCTTCTCTGGCGGGGAGTGTGGCCATGGGATTGCTGTTCTCCCTCTTCTGCATCTTTGGTTTGATCATAATTGCCATTGAGACCAGAAAGAGGAGGAAGAAGAAAGAGGCTGCTCTTGAGGCCTACATGGATGGTAATTCGCATTCGGGTCCAGCCAATGTGAGCTGGAAGCACACCAGTACTCGGGAAGCCCTTAGCATAAACCTTGCAACTTTTGAGAAGCCCCTCCGAAAGCTTACTTTCGCGGACCTTCTTGATGCCACCAATGGCTTTCACAATGACAGTCTCATCGGCTCTGGCGGATTTGGTGATGTATACAAGGCTCAGTTGAAGGACGGAAGTGTTGTTGCTATCAAGAAGCTGATTCATGTCAGTGGACAAGGGGACAGAGAATTCACTGCTGAAATGGAGACCATTGGAAAAATCAAGCACAGGAACCTTGTTCCCTTGCTGGGATACTGCAAGGTTGGGGAGGAGAGACTCTTGGTTTATGAGTATATGAAGTACGGAAGCTTAGAGGATGTTCTGCATGATCAGAAAAAAGCAGGGATAAAGCTGAACTGGTCTATTAGGAGGAAAATTGCCATTGGAGCTGCTAGAGGATTGGCTTTTCTTCACCACAATTGTATCCCTCACATCATTCATAGAGATATGAAGTCAAGCAATGTGTTGCTTGATGAAAACCTAGAAGCGAGGGTGTCTGATTTTGGAATGGCTAGGCTTATGAGTGCTATGGATACACATTTGAGTGAGCTCATGAAGGAAGACCCCAATCTGGAGATGGAACTTTTGCAGCACCTGAAGATTGCGTGTTCCTGTTTGGATGATCGGCCATGGAGGCGTCCCACCATGATTCAAGTAATGGCAATGTTCAAGCAGATTCAGGTGGGATCTGGGATTGATTCTCAGTCAACCATAGCCACCGAAGAGGAAGGTTTCAATGCCGTTGAAATGGTGGAGATGAGCATTAAAGAAGCTCCAGAATTGAGCAAGCACTAG 3342 0.4925 MKALYRGSLFLKFFITLLFIGRASSSLLPTRDPSQQLLSFKASLPNPSLLPNWLPNQTPCSFTGITCNQTHLTSIDLTSIPLSTNFSIVATYLLTLDHLQSISLKSTNLTGPSTIPLSHSKCTSSLTTIDLSQNTLSGSLSDMSFLASCSNLQSLNLSSNLLEFNSSHWKLNLRIADLSNNKISGPGILLWLLNPDIEHLALKGNKITGDTDFSGSTSLQHLDLSSNNFSVAIPSLGECSSLKYLDLSANKYLGDIARTLSPCKTLVYLNVSSNQFSGQVPSLPLGSLQYVYLAANHFHGPIPPALADLCSTLLQLDLSSNNLTGDFPRAFGACSSLQSLDISSNLFSGALPMEVLTQMSSLRELAVAFNEFGGPLPVSLSKLSSLELLDLSSNNFSGPIPGTLCGDAGNNLKELYLQNNRFMGFIPPTLSNCSNLVALDLSFNFLTGTIPPSLGSLSKLRDLIIWLNQLHGEIPQELMYLKNLENLILDFNELSGNIPSGIVNCTKLNWISLSNNRLSGEIPAWIGKLSNLAILKLSNNSFSGRIPPELGDCTSLIWLDLNTNSLTGPIPPELSKQSGNIAVNFINGKTYVYIKNDGSKECHGAGNLLEFAGISQQQLNRISTKNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKELGVMYYLTILNLGHNNVSGSIPQELGKMKNLNILDLSNNRLEGQIPQSLTGLSLLTEIDLSNNMLSGTIPETGQFDTFPAARFQNNSGLCGVPLSPCGSDPANSGSAQHMKSHRGQASLAGSVAMGLLFSLFCIFGLIIIAIETRKRRKKKEAALEAYMDGNSHSGPANVSWKHTSTREALSINLATFEKPLRKLTFADLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKAGIKLNWSIRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSELMKEDPNLEMELLQHLKIACSCLDDRPWRRPTMIQVMAMFKQIQVGSGIDSQSTIATEEEGFNAVEMVEMSIKEAPELSKH* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01101 1113 Pfam Leucine Rich repeats (2 copies) 217 256 IPR025875 -
Phac9g01101 1113 FunFam Serine/threonine-protein kinase BRI1-like 1 586 643 - -
Phac9g01101 1113 SMART serkin_6 872 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01101 1113 Pfam Leucine rich repeat N-terminal domain 35 68 IPR013210 -
Phac9g01101 1113 ProSitePatterns Protein kinases ATP-binding region signature. 878 901 IPR017441 GO:0005524
Phac9g01101 1113 ProSiteProfiles Leucine-rich repeat profile. 218 240 IPR001611 GO:0005515
Phac9g01101 1113 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 407 591 - -
Phac9g01101 1113 SMART LRR_typ_2 383 407 IPR003591 -
Phac9g01101 1113 SMART LRR_typ_2 217 239 IPR003591 -
Phac9g01101 1113 SMART LRR_typ_2 717 740 IPR003591 -
Phac9g01101 1113 SMART LRR_typ_2 411 433 IPR003591 -
Phac9g01101 1113 SMART LRR_typ_2 481 505 IPR003591 -
Phac9g01101 1113 SMART LRR_typ_2 693 716 IPR003591 -
Phac9g01101 1113 SMART LRR_typ_2 529 553 IPR003591 -
Phac9g01101 1113 Gene3D Transferase(Phosphotransferase) domain 1 948 1039 - -
Phac9g01101 1113 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 170 406 - -
Phac9g01101 1113 SUPERFAMILY Protein kinase-like (PK-like) 843 1071 IPR011009 -
Phac9g01101 1113 SUPERFAMILY L domain-like 243 751 - -
Phac9g01101 1113 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Phac9g01101 1113 Pfam Leucine rich repeat 672 730 IPR001611 GO:0005515
Phac9g01101 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 994 1006 IPR008271 GO:0004672|GO:0006468
Phac9g01101 1113 PRINTS Leucine-rich repeat signature 693 706 - -
Phac9g01101 1113 PRINTS Leucine-rich repeat signature 313 326 - -
Phac9g01101 1113 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 410 1030 - -
Phac9g01101 1113 FunFam Os07g0541700 protein 948 1035 - -
Phac9g01101 1113 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 640 762 - -
Phac9g01101 1113 SUPERFAMILY L domain-like 35 282 - -
Phac9g01101 1113 Gene3D Ribonuclease Inhibitor 37 762 IPR032675 -
Phac9g01101 1113 Gene3D - 584 644 - -
Phac9g01101 1113 ProSiteProfiles Protein kinase domain profile. 872 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01101 1113 Pfam Leucine Rich Repeat 411 433 IPR001611 GO:0005515
Phac9g01101 1113 Pfam Leucine Rich Repeat 435 457 IPR001611 GO:0005515
Phac9g01101 1113 Pfam Brassinosteroid receptor island domain 579 643 IPR045381 -
Phac9g01101 1113 Gene3D Phosphorylase Kinase; domain 1 833 947 - -
Phac9g01101 1113 FunFam serine/threonine-protein kinase BRI1-like 2 833 947 - -
Phac9g01101 1113 Pfam Protein tyrosine and serine/threonine kinase 875 1030 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01101 Phac-Chr9 8564691 8568248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01101 35 1031 Receptor kinase-like Gene Family AT4G39400 66.996 0.0 1264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Phac9g01101 PK_Tyr_Ser-Thr 9.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01101 K13415 - gmx:100799772 1726.06