Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01091 ATGATGAACAGCACCGCATTGCCAAGGCTATTTCCGGGCATGAATAGGGAGAGAGAGATGTCTGCTATGGTCTCAGCTTTGACCCACGTCGTCACCGGAGAGGTTCCAACAACCACTGATTCTGTCACACCAGACGTGCCTTCTTCTGCTTCTACAACACCCTCTTTACCTTCTTCATCTAATTATATTCTTGCCACCTCTTCTAGCAAGAGAACTAGGGAACAAGACACACCATGCTTCTCGCAAGCCTCTTCTATACCAAGAAGTGGAGAATGTTCAAACAATTCGAGAAGCAGAATAAGAAGGGAAATGGGAAATGCTGTGTATGAATACAAGACAACAGAGAATGTGAGGAGGGATGAGGAGAGGAGGAAATACAGAGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAGATAAGAGATCCGTTCAAGGCGGCGAGGGTGTGGTTAGGGACGTTTGACACGGCGGAGGCAGCTGCTAGAGCATACGATGAAGCTGCTCTTCGATTTAGAGGAAACAAGGCGAAACTGAACTTCCCTGAGAATGTCACTCTCCGGCAACCTGAGTTTAGTGTTTCCAATTCTGCCACTTCTCTTGCGTCCATTTCAACGTCCACGGATCAAGTTGTGCATACTCCATCTTTTCTCCCTTCTCAAGCTGCGACCAACGTTTACGAGTATTTTCAGCTCTCGGGCTACCCCACCAACCTTTATAATGACAGGACGCTTGTCACGTCTTCCATGGCTTCTCATCTTCACTCTTCTTCCTCTTCTTCTGCGTTTGTATCGTCTTCGCAGGACACTTCACTTTCTTCCTTTTATTCTAGCCAGATACCACCACCTTGGTCAGCTTCTGCTCCTAGCTCTTCTTCCTCAGGATGA 888 0.4842 MMNSTALPRLFPGMNREREMSAMVSALTHVVTGEVPTTTDSVTPDVPSSASTTPSLPSSSNYILATSSSKRTREQDTPCFSQASSIPRSGECSNNSRSRIRREMGNAVYEYKTTENVRRDEERRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVTLRQPEFSVSNSATSLASISTSTDQVVHTPSFLPSQAATNVYEYFQLSGYPTNLYNDRTLVTSSMASHLHSSSSSSAFVSSSQDTSLSSFYSSQIPPPWSASAPSSSSSG* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01091 295 Gene3D AP2/ERF domain 124 184 IPR036955 GO:0003700|GO:0006355
Phac9g01091 295 PANTHER DNA-BINDING DOMAIN 81 262 IPR044808 GO:0003700|GO:0009873
Phac9g01091 295 MobiDBLite consensus disorder prediction 35 97 - -
Phac9g01091 295 FunFam Ethylene-responsive transcription factor 2 124 183 - -
Phac9g01091 295 MobiDBLite consensus disorder prediction 272 295 - -
Phac9g01091 295 SUPERFAMILY DNA-binding domain 125 183 IPR016177 GO:0003677
Phac9g01091 295 CDD AP2 125 184 IPR001471 GO:0003700|GO:0006355
Phac9g01091 295 SMART rav1_2 125 188 IPR001471 GO:0003700|GO:0006355
Phac9g01091 295 MobiDBLite consensus disorder prediction 35 94 - -
Phac9g01091 295 Pfam AP2 domain 125 174 IPR001471 GO:0003700|GO:0006355
Phac9g01091 295 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Phac9g01091 295 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Phac9g01091 295 ProSiteProfiles AP2/ERF domain profile. 125 182 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01091 Phac-Chr9 8435742 8437565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01091 114 187 AP2-EREBP Transcription Factor Family AT5G61890 77.027 3.94e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac9g01091 AP2 3.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01091 - - pvu:PHAVU_009G137900g 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01091 9 8435742 8437565 Phac9g01091 9 8435742 8437565 ECH
Phac2g04035 2 39682114 39683629 Phac9g01091 9 8435742 8437565 ECH