Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01076 ATGGAAGAGAGTATCCTATGCAAACACACAGTGCATCACACCGTCACCAAGAAGCTCCTCTCACCCAAAAAATCCCAAACCAATCCAACCACAGACCGCAGGATAGTCCGGATATCATACACTGATCCGGATGCCACCGACTCTTCCAGCGACGACGAACCCTTTCCCTTCGTCCGCCAAAGAATCAAGCGCTACGTCAACCAGATTGAGATAGAAACTGCCACCACCGCCGCCCCCAACGTCCTTTCCAATGCTCGCAAGAGGCCCGCCGCCGAGCCATGCCGCCGCCAAGTCAAGCTCCACTCCGGCAAGAAGTTCCGCGGTGTCCGCCAGAGACCGTGGGGAAAATGGGCGGCGGAGATTCGAGATCCGGCCAGAAGGGTGCGTCTTTGGTTGGGAACTTACGACACTGCCGAAGAAGCCGCCATGGTCTACGACAATGCCGCTATTAGGCTTCGCGGCCCGGACGCCTTGACAAACTTCGTAACGCCGCCGCTAAAAGAACCTCCGCCGGCTGCTGCGGCGGACGTTCCGGAATTGAAGGTCGGCGTCCCAGAGGCGTCTGGGTCCGCGTACGGGTACGACTCCGGCGACGATCACTGCCACCATAACCTTGCCTCTCCCACTTCGGTGCTCCATTTCCGAAGCAACTCGAGCGAAGAGAATTCAGAGAAAACCGAGGAAGTGTTGAGAGAGTGCCAGGGCGAGACTGAAACGAGTTTGTTCGACGAAACGGGGGAGTTTTTGGCGCTGGACAACTTGCCTGCGTGGGATGACGTGTTCAATTTTGAAACCCCGGAGTACCCTCTTGTGTTTGAAGAAGAGCATGTATTAGATGAGTCCCAGATGTTGGGCGAAACCTTAGCGTTTTCCTCGAATGAAGGTTTCAGCGACACTAGTAGTATTTTGCTTGCGGATTCCCTCATAGATTTCGACAAAGCGTGCCCTCCATCCACCCTCTGCCAAGTGGACGATTACTTCCAAGACATTTTGCTGGCTTCTGATCCTCTCGTTCTCCTCTGA 1023 0.5513 MEESILCKHTVHHTVTKKLLSPKKSQTNPTTDRRIVRISYTDPDATDSSSDDEPFPFVRQRIKRYVNQIEIETATTAAPNVLSNARKRPAAEPCRRQVKLHSGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIRLRGPDALTNFVTPPLKEPPPAAAADVPELKVGVPEASGSAYGYDSGDDHCHHNLASPTSVLHFRSNSSEENSEKTEEVLRECQGETETSLFDETGEFLALDNLPAWDDVFNFETPEYPLVFEEEHVLDESQMLGETLAFSSNEGFSDTSSILLADSLIDFDKACPPSTLCQVDDYFQDILLASDPLVLL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01076 340 SMART rav1_2 105 168 IPR001471 GO:0003700|GO:0006355
Phac9g01076 340 SUPERFAMILY DNA-binding domain 105 162 IPR016177 GO:0003677
Phac9g01076 340 Gene3D AP2/ERF domain 104 163 IPR036955 GO:0003700|GO:0006355
Phac9g01076 340 PRINTS Ethylene responsive element binding protein signature 128 144 IPR001471 GO:0003700|GO:0006355
Phac9g01076 340 PRINTS Ethylene responsive element binding protein signature 106 117 IPR001471 GO:0003700|GO:0006355
Phac9g01076 340 Pfam AP2 domain 105 154 IPR001471 GO:0003700|GO:0006355
Phac9g01076 340 ProSiteProfiles AP2/ERF domain profile. 105 162 IPR001471 GO:0003700|GO:0006355
Phac9g01076 340 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 237 - -
Phac9g01076 340 CDD AP2 104 161 IPR001471 GO:0003700|GO:0006355
Phac9g01076 340 FunFam Ethylene-responsive transcription factor 2 104 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01076 Phac-Chr9 8230034 8232264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01076 7 221 AP2-EREBP Transcription Factor Family AT4G27950 48.879 2.93e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac9g01076 AP2 8.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01076 - - gmx:100807598 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01076 9 8230034 8232264 Phac9g01076 9 8230034 8232264 ECH