Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00998 ATGGATAGCCCTCCTATTCCATCTTACGTCGTGGTTGCATGTGATGCCACAAGGGACCGCACTGAACACGAGATCAAACTCGTTGTTGATCATGTTCGGTCCAGTGGTGTCTTTCTCTCAAATGGTGACAAGCTTCTTGTGCTTTGTGTATTGCACAAAGTCTCTCACCCTATGGGGTACCAGACGTTAGCATGTCCCGAGTCTTTTGCTGGAACTAACTTTCGTACAATGGAGGAAGAAGTAAAAAAGAAAGTTGATACATATGCTAGTGAGCTTTTATCAAGTTATGAAGATTTTCAAAGTGAAGGGGCTACAATTGAAGTTAAAGTCACCGCAGGATTTCCAATTAAACAGGTTGTTTTACAGGAGATTACAAACTATAATGCATCTTGGATAATACTTGACAGACATCTTCGGCGCGACCTGAGATACCACCTTAACAAGTTGCCATGTAAGGTTGCATTGCTTAAAGATGACTTGTCTCTGGAGATTTGGAAATCTCATTATACACAAGACACAAAGGTCACAGCAACAAAATTTGTATTTTCTTTATCAAAGTTTGTGTCGCTATCAGATTGTCATAGCATTGAAGACATTGAGCACTCTATTGTCTCTTACAAAAGCTATCCCCATTCTATAGTTTCTTCTGATACCAGTGGTACGCTTAGGAGCTATACGAAGCATTCAAGTGGTAACAGGTCGCGCGATTACAATTTCGTATCAGAATTTGGATCCTCTTCTAAGCAAGAAAGATCAGACATAAGCACTAAAGGAGAATATAGGTATCTCACTAGTTCTCAGATTGACCAAAAGCAAAACCAAAGTGGCTTTCTGCCAAAACATTCAGATGCACCGCTTCTTTGTACTGGCTGTGGGACAAGAACAGAGTTATCTATCAAAGAGTCAATGAAGTTTAGCTACTCTGACATACAACTTGCAACAAATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGCTATGGTCACGTATACAAGGGCGTGCTTAAAGATGGACAGCAAATTGCGGCAAAGGTAAGGAAAGAAGAAAGTTCACAAGGATTTTCTGAATTTCATTCTGAGGTGTACGTGTTAAGTTTTGCTCGACACAAGAATATAGTGATGCTGTTGGGTTATTGTTGTAAAGAAAAGAAAAACATCCTCATTTATGAATATATTTGCAACAAGTCTCTCCATTGGCATTTATTTGAAAATGATGCAGCAGTTCTTGAGTGGCACCAGAGGTATGCTATTGCCATTGGGATTGCAAAGGGATTGCGTTTTCTACATGAGGAATGCCGTGGTGGTCCTATTATTCATCGGGACATGCGACCAAGCAATATACTTCTCACCCACGATATTGTTCCCATGCTAGGTGACTTTGGGCTTGCCAAATGGAAGACTGGTAATGAAAGTCCTCAAACAATGATAATGGGCACATTAGGATACCTTGCTCCTGAGTATGCTGAAGACGGTATTGTTTCTGAGGGAACAGATGTGTATTCTTATGGCATTATCCTGTTACAATTGATATCGGGACGCCAGGTTGGGAATTCCAACAATCCAGAACAACAACAATCTCTCCGACAATGGGCTGAGCCAATGATAGAGAAGTTGGCCTTACATGAACTGATTGACACTCGTCTAGGGGAATCATATGACACGTATGAACTCTACCTCATTGCTAAAGCAGCATACTTCTGTGTGCAAAGGAAGCCTGAGATGCGTCCATCAATGGGAGAGGTACTTACTTCAACCTCGTTATTACTTTCACCAACTCTTTTATTTTTATTTACAACATCAACATCTAACATTAATGTTCATAAGAGATGA 1833 0.4032 MDSPPIPSYVVVACDATRDRTEHEIKLVVDHVRSSGVFLSNGDKLLVLCVLHKVSHPMGYQTLACPESFAGTNFRTMEEEVKKKVDTYASELLSSYEDFQSEGATIEVKVTAGFPIKQVVLQEITNYNASWIILDRHLRRDLRYHLNKLPCKVALLKDDLSLEIWKSHYTQDTKVTATKFVFSLSKFVSLSDCHSIEDIEHSIVSYKSYPHSIVSSDTSGTLRSYTKHSSGNRSRDYNFVSEFGSSSKQERSDISTKGEYRYLTSSQIDQKQNQSGFLPKHSDAPLLCTGCGTRTELSIKESMKFSYSDIQLATNDFSKDNLLGEGGYGHVYKGVLKDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKEKKNILIYEYICNKSLHWHLFENDAAVLEWHQRYAIAIGIAKGLRFLHEECRGGPIIHRDMRPSNILLTHDIVPMLGDFGLAKWKTGNESPQTMIMGTLGYLAPEYAEDGIVSEGTDVYSYGIILLQLISGRQVGNSNNPEQQQSLRQWAEPMIEKLALHELIDTRLGESYDTYELYLIAKAAYFCVQRKPEMRPSMGEVLTSTSLLLSPTLLFLFTTSTSNINVHKR* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00998 610 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 393 592 - -
Phac9g00998 610 ProSitePatterns Tyrosine protein kinases specific active-site signature. 438 450 IPR008266 GO:0004672|GO:0006468
Phac9g00998 610 SUPERFAMILY Protein kinase-like (PK-like) 301 585 IPR011009 -
Phac9g00998 610 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Phac9g00998 610 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 289 392 - -
Phac9g00998 610 Pfam Protein kinase domain 318 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00998 610 Gene3D Transferase(Phosphotransferase) domain 1 394 592 - -
Phac9g00998 610 PANTHER OS01G0253100 PROTEIN 232 586 - -
Phac9g00998 610 Gene3D Phosphorylase Kinase; domain 1 290 392 - -
Phac9g00998 610 CDD STKc_IRAK 323 582 - -
Phac9g00998 610 ProSiteProfiles Protein kinase domain profile. 317 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00998 Phac-Chr9 7561962 7565959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00998 305 589 Trihelix Transcription Factor Family AT5G38560 43.493 4.72e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phac9g00998 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00998 - - vun:114163670 1103.58