Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00997 ATGGATAGCCCTCCTATTCCATCTTACGTCGTGGTTGCATGTGATGCCACAAGGGACCGCACTGAACACGAGATCAAACTCGTTGTTGATCATGTTCGGTCCAGTGGTGTCTTTCTCTCAAATGGTGACAAGCTTCTTGTGCTTTGTGTATTGCACAAAGTCTCTCACCCTATGGGGTACCAGACGTTAGCATGTCCCGAGTCTTTTGCTGGAACTAACTTTCGTACAATGGAGGAAGAAGTAAAAAAGAAAGTTGATACATATGCTAGTGAGCTTTTATCAAGTTATGAAGATTTTCAAAGTGAAGGGGCTACAATTGAAGTTAAAGTCACCGCAGGATTTCCAATTAAACAGGTTGTTTTACAGGAGATTACAAACTATAATGCATCTTGGATAATACTTGACAGACATCTTCGGCGCGACCTGAGATACCACCTTAACAAGTTGCCATGTAAGGTTGCATTGCTTAAAGATGACTTGTCTCTGGAGATTTGGAAATCTCATTATACACAAGACACAAAGGTCACAGCAACAAAATTTGTATTTTCTTTATCAAAGTTTGTGTCGCTATCAGATTGTCATAGCATTGAAGACATTGAGCACTCTATTGTCTCTTACAAAAGCTATCCCCATTCTATAGTTTCTTCTGATACCAGTGGTACGCTTAGGAGCTATACGAAGCATTCAAGTGGTAACAGGTCGCGCGATTACAATTTCGTATCAGAATTTGGATCCTCTTCTAAGCAAGAAAGATCAGACATAAGCACTAAAGGAGAATATAGGTATCTCACTAGTTCTCAGATTGACCAAAAGCAAAACCAAAGTGGCTTTCTGCCAAAACATTCAGATGCACCGCTTCTTTGTACTGGCTGTGGGACAAGAACAGAGTTATCTATCAAAGAGTCAATGAAGTTTAGCTACTCTGACATACAACTTGCAACAAATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGCTATGGTCACGTATACAAGGGCGTGCTTAAAGATGGACAGCAAATTGCGGCAAAGGTAAGGAAAGAAGAAAGTTCACAAGGATTTTCTGAATTTCATTCTGAGGTGTACGTGTTAAGTTTTGCTCGACACAAGAATATAGTGATGCTGTTGGGTTATTGTTGTAAAGAAAAGAAAAACATCCTCATTTATGAATATATTTGCAACAAGTCTCTCCATTGGCATTTATTTGAAAATGATGCAGCAGTTCTTGAGTGGCACCAGAGGTATGCTATTGCCATTGGGATTGCAAAGGGATTGCGTTTTCTACATGAGGAATGCCGTGGTGGTCCTATTATTCATCGGGACATGCGACCAAGCAATATACTTCTCACCCACGATATTGTTCCCATGCTAGGTGACTTTGGGCTTGCCAAATGGAAGACTGGTAATGAAAGTCCTCAAACAATGATAATGGGCACATTAGGATACCTTGCTCCTGAGTATGCTGAAGACGGTATTGTTTCTGAGGGAACAGATGTGTATTCTTATGGCATTATCCTGTTACAATTGATATCGGGACGCCAGGTTGGGAATTCCAACAATCCAGAACAACAACAATCTCTCCGACAATGGGTATCTTTGATTGTTTACGTCTTTAGATATATTCAAAACCATTGA 1638 0.4011 MDSPPIPSYVVVACDATRDRTEHEIKLVVDHVRSSGVFLSNGDKLLVLCVLHKVSHPMGYQTLACPESFAGTNFRTMEEEVKKKVDTYASELLSSYEDFQSEGATIEVKVTAGFPIKQVVLQEITNYNASWIILDRHLRRDLRYHLNKLPCKVALLKDDLSLEIWKSHYTQDTKVTATKFVFSLSKFVSLSDCHSIEDIEHSIVSYKSYPHSIVSSDTSGTLRSYTKHSSGNRSRDYNFVSEFGSSSKQERSDISTKGEYRYLTSSQIDQKQNQSGFLPKHSDAPLLCTGCGTRTELSIKESMKFSYSDIQLATNDFSKDNLLGEGGYGHVYKGVLKDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKEKKNILIYEYICNKSLHWHLFENDAAVLEWHQRYAIAIGIAKGLRFLHEECRGGPIIHRDMRPSNILLTHDIVPMLGDFGLAKWKTGNESPQTMIMGTLGYLAPEYAEDGIVSEGTDVYSYGIILLQLISGRQVGNSNNPEQQQSLRQWVSLIVYVFRYIQNH* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00997 545 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 275 532 - -
Phac9g00997 545 ProSitePatterns Tyrosine protein kinases specific active-site signature. 438 450 IPR008266 GO:0004672|GO:0006468
Phac9g00997 545 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Phac9g00997 545 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 289 392 - -
Phac9g00997 545 Gene3D Transferase(Phosphotransferase) domain 1 393 540 - -
Phac9g00997 545 Pfam Protein kinase domain 318 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00997 545 SUPERFAMILY Protein kinase-like (PK-like) 299 532 IPR011009 -
Phac9g00997 545 ProSiteProfiles Protein kinase domain profile. 317 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00997 545 Gene3D Phosphorylase Kinase; domain 1 290 392 - -
Phac9g00997 545 FunFam Os07g0541700 protein 393 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00997 Phac-Chr9 7561962 7565959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00997 248 532 Trihelix Transcription Factor Family AT1G26150 41.497 3.47e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phac9g00997 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00997 - - vun:114163670 1006.13