Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00973 ATGCGTGTCCGTTTAAAGCAGCTGCTACTTGTTGTGCTCCTGGCTGCAGCAGCAGCAGCAGCTAAAACCCAACCTATGTCAAAGCCAAACTGCACAACAAAGTGTGGCAACGTCACCATTCCCTTTCCCTTTGGCCTCACAAAGCTCTGTTCTCTCAACTCCTCATTTCTCATCACTTGCAACCAAAACATTCCATTCTTGAAAACTTTTTATCAAGATGTGCGTGTGCTTAACATCTCACTCGACGGCCAACTGGACATTTCATTGCCAGTTGCCACAAGTTGCGTCAATAACAACAAGACAAGTGAATCAGAGAACGGCACGGAGTACAAATTCTACAGACCTTTTCACCTTCCATCCAAGCAAAACAAGTTAACTGTATTGGGCGCTAACACTGCAGGAGTAGTAGATGCTGTAGATTCAACATTCGAATACGCTACTAGTTTGTGCGTGTCTGTGTACAGTAGAATGATGGACGAGGAGCCACCACATGACGAGTCATGCTCCGGCCGTTTTTGTTGCGAGACTCCAATTCGACAAAGGCTATCGGATTTCTATATTTATTCTCTACATATCTCCATAAATAACATGAACAAAACATTCAAGTCCTACCCATGTGGTTATGCATTTCTGGTTAAGGAGGGAGCCTACAATTTCTCCATGGCAAACCTGCACAATTTTCACACCAGCAGCACGTTTCCTGCGGTTATGGATTGGGCAGTGGGGAACACGTGCCTAGGTGATAAAAATAATACTTCAAGTTATGCGTGTAAGTCAAACCACAGTGAATGTCACAATGCAGAGGTGGGACCTGGTTACCATTGTAAATGCTCCAGTGGTTTTCGGGGAAACGCATATCTACTTGATGGTTGTCTAGATGTTGACGAATGCGCTGAAGGATTGCACGACTGTTTAAAGGGGAGATCAACATGCAGCAACAGTCCAACAGGGAGCTACAGTTGTTCTTGTCCAAAGGGATATGAAGGAGATGGGAAAAACAATGGAACCGGATGTCTTCGCAGGAGTTACAGCAAAATCATAATTGCTTTCAGTGTGAGTGGAAGTATATTGGCACTTGTGGGGGGAACCTTATACGTGTACTGTGCATTAAAGAAAAGAAAACTCAACAAACTTAAAGAACAATTTTTTGAACTAAACGGTGGCCTGATATTACAACAGCAGATAGGCAGGTATGGTGGATCATCTGAAATGACAAAAATCTTTACTGTGAAAGAACTAAAAGAGGCCACCAACAATTTCAATGAAGACATGGTCTTAGGGGAAGGTGGGCAGGGAACAGTTTACAAAGGAATATTACCTGATAATAGGACTGTAGCAATAAAAATGTCCAGAATTAGTAACCCAAACCAAATTGAGCATTTCATCAATGAGGTGATTCTGCTTTGTCAAATCAATCACAGAAATGTGGTGAAACTCTTGGGATGTTGTTTAGAGACAGAAGTTCCCTTACTTGTTTATGAATTTGTTCCCAATGGAACTGTTTACGAGAATCTATACGATCAAAGCCAATCTTTAAGACTTACATGGAAAAGAAGATTACAAATAGCAACACAAACTGCTGGGGCCCTGGCATACTTGCATTCTGCTACCAATGCACCAATCGTACATAGAGATGTGAAAACTTCAAACATACTACTTGATCACAACTTCACTGCAAAGGTTTCTGATTTTGGAGCCTCGAGGATTATTCCTGTTGATCGAACTGAGTTAACCACTTTGGTGTTGGGGACACTGGGTTATCTTGACCCAGAATACTTCCACTCAAGCCAGCTAACAGAGAAAAGTGATGTCTATAGTTTTGGAGTTGTTCTAGCCGAACTTCTAACAGGAAAGAAGGCACTCTCTTTTGAAAGGCCAGATGCTCATAGAAACTTAGCGGTTCACTTCCATTCTTCAATGAATGAGGGTCAGTTACTTAACATTGTAGATAGCCGCATAATAGATGAGGCAAATGTTGAGCAACTAATGGATGTTGCCAATATTGCAAGCCACTGTTTGAGGTTGAAGGGGGAGGAAAGGCCCACCATGAGAGAAGTGGCAATAGAACTTGAAGGAATAAACATTGTGGAGAAGCACCAATGGGAAAAAGTCAACTTGTCGTCAGAGGAGACTGAAAATCTTCTCAAAGCAATACCATCATCTTCTTTTAGCATTGATGGTGTTAACAGAAGAAGCATTCCTTCTGGCTGTGATATTTCAAACCGAATTTCCTTGTCCTTAACTAGTGGAAGATGA 2256 0.4198 MRVRLKQLLLVVLLAAAAAAAKTQPMSKPNCTTKCGNVTIPFPFGLTKLCSLNSSFLITCNQNIPFLKTFYQDVRVLNISLDGQLDISLPVATSCVNNNKTSESENGTEYKFYRPFHLPSKQNKLTVLGANTAGVVDAVDSTFEYATSLCVSVYSRMMDEEPPHDESCSGRFCCETPIRQRLSDFYIYSLHISINNMNKTFKSYPCGYAFLVKEGAYNFSMANLHNFHTSSTFPAVMDWAVGNTCLGDKNNTSSYACKSNHSECHNAEVGPGYHCKCSSGFRGNAYLLDGCLDVDECAEGLHDCLKGRSTCSNSPTGSYSCSCPKGYEGDGKNNGTGCLRRSYSKIIIAFSVSGSILALVGGTLYVYCALKKRKLNKLKEQFFELNGGLILQQQIGRYGGSSEMTKIFTVKELKEATNNFNEDMVLGEGGQGTVYKGILPDNRTVAIKMSRISNPNQIEHFINEVILLCQINHRNVVKLLGCCLETEVPLLVYEFVPNGTVYENLYDQSQSLRLTWKRRLQIATQTAGALAYLHSATNAPIVHRDVKTSNILLDHNFTAKVSDFGASRIIPVDRTELTTLVLGTLGYLDPEYFHSSQLTEKSDVYSFGVVLAELLTGKKALSFERPDAHRNLAVHFHSSMNEGQLLNIVDSRIIDEANVEQLMDVANIASHCLRLKGEERPTMREVAIELEGINIVEKHQWEKVNLSSEETENLLKAIPSSSFSIDGVNRRSIPSGCDISNRISLSLTSGR* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00973 751 ProSiteProfiles Protein kinase domain profile. 420 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00973 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 698 IPR045274 GO:0007166
Phac9g00973 751 CDD STKc_IRAK 426 693 - -
Phac9g00973 751 Pfam Wall-associated receptor kinase galacturonan-binding 31 84 IPR025287 GO:0030247
Phac9g00973 751 Pfam Protein tyrosine and serine/threonine kinase 424 688 IPR001245 GO:0004672|GO:0006468
Phac9g00973 751 SMART egfca_6 293 339 IPR001881 GO:0005509
Phac9g00973 751 FunFam Wall-associated receptor kinase 2 496 713 - -
Phac9g00973 751 Gene3D Laminin 296 339 - -
Phac9g00973 751 CDD EGF_CA 293 330 - -
Phac9g00973 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Phac9g00973 751 FunFam Wall-associated receptor kinase 2 390 495 - -
Phac9g00973 751 Gene3D Laminin 243 295 - -
Phac9g00973 751 Gene3D Transferase(Phosphotransferase) domain 1 496 715 - -
Phac9g00973 751 SUPERFAMILY EGF/Laminin 291 338 - -
Phac9g00973 751 ProSiteProfiles EGF-like domain profile. 293 333 IPR000742 -
Phac9g00973 751 Pfam Calcium-binding EGF domain 293 335 IPR001881 GO:0005509
Phac9g00973 751 Gene3D Phosphorylase Kinase; domain 1 397 495 - -
Phac9g00973 751 SMART egf_5 244 292 IPR000742 -
Phac9g00973 751 SMART egf_5 296 339 IPR000742 -
Phac9g00973 751 FunFam Fibrillin 2 288 334 - -
Phac9g00973 751 SUPERFAMILY Protein kinase-like (PK-like) 403 695 IPR011009 -
Phac9g00973 751 SMART serkin_6 420 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00973 Phac-Chr9 7467276 7471886 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00973 1 715 Receptor kinase-like Gene Family AT1G21230 43.033 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phac9g00973 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00973 - - vum:124835050 1105.51