Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g00971 | ATGTCTGTGCACTCTAAGCAGCTGCTACTGCAGGTGCTTCTTGTTGCCCTCCTTATTGCAAAAACTAAAACTCAAGCCATTCCAAACCCAAACTGTTCTTCAAAGTGTGGCGATGTCACCATTCCCTTCCCCTTCGGCATGTCCGACACTTGTTCCTTAGACACCTCATTTCTCCTCACTTGCAACCAAACATCTCCTTCATCACACACCCTTTTCCTGCCACAAACCAATATAACTGTGCTTAACATCTCACTCGACGGCCACATGCAAATTTCATGGCCTGTGGCCAGCGACTGCTACGCCGACAGAGGCAAACTCGTGAGGGAATCATTTCAAGACCTAAACCTCACAACTTTTCAAGTCTCTTCCAACAGAAACAGGTTGACTGTAATTGGGTGTGACACGTTTGGAATAGTGGAGGGAAGCGATTTGGAGGGAAAGAACTACACCGTGGGATGCATTTCCTTGTGCAACAGGCTCCAAGACATCCAAACAAACGGGACTTGTTCCGGCACCGGTTGTTGCGAGACTTCGATCCCACGCGGGTTGTCGAGTTTCTCCTACGGTTCTGGGAGTTTGTTCAACCACACGGACGTAATGGACTTCAACCCGTGCGGGTATGCGTTCCTGGTGGAAGATGGGGCCTACAATTTCTCCTCCACGGACCTCGTCAAGTTCGACAAAACCACGTTCCCCGTGGTGGTGGATTGGGCGGTTAAGAACCAAACGTGCGTAGACGCTAAGAAAGAGGCTTCCAATTACGCGTGTAAGGCAGAGAACAGTGATTGTTTCCATTCAGTTGAAGGATCTGGTTACCTTTGCAGATGCTCAAATGGTTTCCAGGGAAACCCTTATCTTCTTCATGGTTGTCAAGATGTTAATGAATGCATGGGATCCAACGATTGCGTAGATGGGGCCAAATGCAGTAACTCTCCTGGTGGTTATAACTGTTTATGCCCAAAAGGATTTGAAGGAGATGGACAAAAATATGGAACAAGATGCACTCACAAATCTAGCATCAACTCAAGGAAAGAAATCATACTCATAATTGCTTTGAGTGTGAGTGTAAGCCTAGTGGCACTACTTGTGGGAAGCTTTTATGTGCATTGGGCATCAAAGAAAAGAAAGATCATTCAACTTAAAGAACAATTTTTTCAACAAAATGGTGGTCTTTTCTTACAACAACACATAATCAAGCATAAAGGATCAATTGAAACGGCTAAAGTCTTCACTGTAGAGGAGCTAAAAGACGCCACCGACAACTTTGATGAAGGCAAGATCCTTGGCCAAGGTGGTCAAGGAACAGTTTACAAAGGAGTATTGCTGGACAATAGAACTGTGGCAATTAAGAAGTCTAAAATCAGCGATCCAAATCAGATTGAGCAATTCATTAACGAGGTGATTGTGCTTTCCCAAATCAGTCATAGGAACACTACAAAAAAAACTTTTATTAGAAAGGGCCAAAGGCTGACACTAATCACAAAAAGCCCACGCAAAAATGCAATTAACGTGGGCTTTGCCTTCACACAACTTTGA | 1536 | 0.4466 | MSVHSKQLLLQVLLVALLIAKTKTQAIPNPNCSSKCGDVTIPFPFGMSDTCSLDTSFLLTCNQTSPSSHTLFLPQTNITVLNISLDGHMQISWPVASDCYADRGKLVRESFQDLNLTTFQVSSNRNRLTVIGCDTFGIVEGSDLEGKNYTVGCISLCNRLQDIQTNGTCSGTGCCETSIPRGLSSFSYGSGSLFNHTDVMDFNPCGYAFLVEDGAYNFSSTDLVKFDKTTFPVVVDWAVKNQTCVDAKKEASNYACKAENSDCFHSVEGSGYLCRCSNGFQGNPYLLHGCQDVNECMGSNDCVDGAKCSNSPGGYNCLCPKGFEGDGQKYGTRCTHKSSINSRKEIILIIALSVSVSLVALLVGSFYVHWASKKRKIIQLKEQFFQQNGGLFLQQHIIKHKGSIETAKVFTVEELKDATDNFDEGKILGQGGQGTVYKGVLLDNRTVAIKKSKISDPNQIEQFINEVIVLSQISHRNTTKKTFIRKGQRLTLITKSPRKNAINVGFAFTQL* | 512 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g00971 | 511 | Pfam | Calcium-binding EGF domain | 292 | 334 | IPR001881 | GO:0005509 | |
Phac9g00971 | 511 | ProSiteProfiles | EGF-like domain profile. | 292 | 335 | IPR000742 | - | |
Phac9g00971 | 511 | SUPERFAMILY | Protein kinase-like (PK-like) | 408 | 480 | IPR011009 | - | |
Phac9g00971 | 511 | Pfam | Wall-associated receptor kinase galacturonan-binding | 32 | 88 | IPR025287 | GO:0030247 | |
Phac9g00971 | 511 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 308 | 319 | IPR000152 | - | |
Phac9g00971 | 511 | ProSiteProfiles | Protein kinase domain profile. | 422 | 511 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phac9g00971 | 511 | PANTHER | OSJNBA0016N04.9 PROTEIN | 8 | 319 | - | - | |
Phac9g00971 | 511 | Gene3D | Laminin | 238 | 334 | - | - | |
Phac9g00971 | 511 | SMART | egf_5 | 255 | 291 | IPR000742 | - | |
Phac9g00971 | 511 | SMART | egf_5 | 295 | 335 | IPR000742 | - | |
Phac9g00971 | 511 | CDD | EGF_CA | 292 | 326 | - | - | |
Phac9g00971 | 511 | Gene3D | Phosphorylase Kinase; domain 1 | 394 | 493 | - | - | |
Phac9g00971 | 511 | FunFam | Fibrillin 2 | 287 | 330 | - | - | |
Phac9g00971 | 511 | ProSitePatterns | Calcium-binding EGF-like domain signature. | 292 | 317 | IPR018097 | GO:0005509 | |
Phac9g00971 | 511 | SUPERFAMILY | EGF/Laminin | 291 | 329 | - | - | |
Phac9g00971 | 511 | SMART | egfca_6 | 292 | 335 | IPR001881 | GO:0005509 | |
Phac9g00971 | 511 | Pfam | Protein tyrosine and serine/threonine kinase | 425 | 494 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g00971 | Phac-Chr9 | 7446408 | 7448278 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g00971 | 1 | 480 | Receptor kinase-like Gene Family | AT1G21250 | 39.228 | 1.80e-104 | 327 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Phac9g00971 | PK_Tyr_Ser-Thr | 3e-05 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g00971 | - | - | var:108330433 | 860.907 |