Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00970 ATGGCTTCAGCACGAGACAATACAATAGTTGTGCTAGTTGCTTGCTTTGTAATGATCTCAGCAGCGTCACAAACAATTCGCCCTAGCTGCCAACATAAATGTGGAAGCCTTAACATTCCGTACCCATTTGGTACAACGGAGGACTGTTACTTGAACAGCAACTTTTATGTTGCTTGTCACACAAGTCACAAGCCTCCCAAACTATTTCTGTGGAATGTGACAAAAAATATTGAGATCTTAGAGGTATCATTGAATGGTCATTTGCGGGTAAAATCCCCTGTAGCTTATGTCTGCTATGATGAAAAGGGTGTGCTAGTGGATTCGGGGAATTCATCTATGACTTTACAAGCATTCCCTTTCTCCTACACCCAAAACAAGTTCGTTGGAGTTGGATGCGACACCCTTTCAACCATCAATGCAACAATTGGGAAAAACTACTCTGCTGGAGGGTGTTTTTCACTTTGTACTAGTGTAGAAAGTTCAACCAATGGATCCCAGTTTGGCATTGGTTTCTGCCAAACCTCTATCACAAAAAACATTTTGGAATATCAAGCTCGTGTCATGAGATCAAATATGCGGCATAGGGATATGAATATTCCTTGTAGCTACTCTCTTTTGGTGGAAGAAGACTCTTTAAAGTTTTCCACGGATGACTTCATCAAACTGCAGAATTATGTTTCCCAAGAAAATAGCGTATGCATCGATTCTCAAAATGGACGCGGGTACCTCTGCGGATGCTTAGAAGGTTATGTGGGAAATGCATACCTTCATGGTGGATGCCATGATATTGACGAGTGTGCCAATCCGAGTCTAAATGACTGTTCAGACATTTGCATTAACCTACCAGGGAGCTATAATTGTTCCTGTCCCAAGACCGGGAAGCACCTGGGAGATGGCAGAAAAGGAGGAAGTGGCTGTGTGTCTAATCTACAACATGTGGTTAACGAGATTGTGATAGGAACTGGCATAGGCCTTGTGCTGTTGTTAATTGGTAGTGGCTGGCTATACCACGTGTTTGGTAAAAGAAAACGGGTGAGGCTCGCAGCAAGATATTTTAAGAGTAATGGTGGCTTAATGTTACAGCAGCAAATTTCAAAGATGGAGGGATCATTCGAGATAGCTAAAATATTTACTGCAAGAGAGCTAAAGAAAGCCACTGAAAACTTTCACGAAAGCAGAATCATTGGCAGAGGAGGATACGGCACAGTTTATAAGGGGATTCTTCCAAATGACCAAGTTGTTGCCATAAAGAAATCAAAACTAGTAGATCACAGCCAAATTGAACAATTTGTCAATGAAGTGGTTGTACTTTCCCAAATTAACCACAGAAATGTGACAGAAAGGCCACTGCTAGTTTATGAATTTGTGAACAATGGAACACTCTTTGACCACATTCACAATGAAAACACCACACTTCCCTGGGAAACACGTCTAAGAATAGCAGCAGAAACAGCTGGTGTGCTTGCCTACTTGCATTCTTCTGCTTCCATACCAATCATCCACGGGGACTTCAAGTCAACTAACATACTCTTAGATGACAAATACACAGTTAAGGTTTCTGACTTTGGAACCTCTAGATTGGTTCCACGTGACAAGTGTCAGTTGACAACATTGGTTCAGGGAACTCTTGGGTACCTTGACCCTGAATACTTTCAGACCAGTCAACTAACTGAGAAAAGCGATGTGTATAGCTTTGGTGTTGTACTTGCTGAGTTGCTTACTGGAAGAAGGGCACTTTCTTTTGACATGCCAGAGGAGAAGAGGAATTTGGCGTTGTATTTTCTTTCGGCTGTGAAGGATGATTGCTTGTTCCAAATTGTTGAGGATTGTGTCAATGAGGGAAATAGTGAGCAAGTGAAGGAAGTTTCTAACATTGCTCAATGGTGCTTGAGGCTTAGAGGTGAGGAAAGACCTAGCATGAAGGAAGTCGCTATGGAATTGGAAAGTCTCAAAACGATGACAACAACTTCATTGATTAATGCCTCATCAAATGGAGAAGAATATGTTATTGGTGAAAGATCAGGTTCAGCAGAAAGAGACACTGCTAATTGTCACTATACTTATGCTAAATGTGCTGGCCTGAGGATGATGCCATTTGCAACGATGTGA 2109 0.4177 MASARDNTIVVLVACFVMISAASQTIRPSCQHKCGSLNIPYPFGTTEDCYLNSNFYVACHTSHKPPKLFLWNVTKNIEILEVSLNGHLRVKSPVAYVCYDEKGVLVDSGNSSMTLQAFPFSYTQNKFVGVGCDTLSTINATIGKNYSAGGCFSLCTSVESSTNGSQFGIGFCQTSITKNILEYQARVMRSNMRHRDMNIPCSYSLLVEEDSLKFSTDDFIKLQNYVSQENSVCIDSQNGRGYLCGCLEGYVGNAYLHGGCHDIDECANPSLNDCSDICINLPGSYNCSCPKTGKHLGDGRKGGSGCVSNLQHVVNEIVIGTGIGLVLLLIGSGWLYHVFGKRKRVRLAARYFKSNGGLMLQQQISKMEGSFEIAKIFTARELKKATENFHESRIIGRGGYGTVYKGILPNDQVVAIKKSKLVDHSQIEQFVNEVVVLSQINHRNVTERPLLVYEFVNNGTLFDHIHNENTTLPWETRLRIAAETAGVLAYLHSSASIPIIHGDFKSTNILLDDKYTVKVSDFGTSRLVPRDKCQLTTLVQGTLGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTGRRALSFDMPEEKRNLALYFLSAVKDDCLFQIVEDCVNEGNSEQVKEVSNIAQWCLRLRGEERPSMKEVAMELESLKTMTTTSLINASSNGEEYVIGERSGSAERDTANCHYTYAKCAGLRMMPFATM* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00970 702 ProSiteProfiles Protein kinase domain profile. 389 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00970 702 ProSitePatterns Calcium-binding EGF-like domain signature. 262 287 IPR018097 GO:0005509
Phac9g00970 702 Gene3D Laminin 223 264 - -
Phac9g00970 702 ProSitePatterns Protein kinases ATP-binding region signature. 395 418 IPR017441 GO:0005524
Phac9g00970 702 Pfam Protein kinase domain 389 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00970 702 FunFam Wall-associated receptor kinase 2 456 669 - -
Phac9g00970 702 Gene3D Phosphorylase Kinase; domain 1 360 455 - -
Phac9g00970 702 SMART egfca_6 262 307 IPR001881 GO:0005509
Phac9g00970 702 Gene3D Laminin 265 301 - -
Phac9g00970 702 Pfam Wall-associated receptor kinase galacturonan-binding 30 89 IPR025287 GO:0030247
Phac9g00970 702 Gene3D Transferase(Phosphotransferase) domain 1 456 670 - -
Phac9g00970 702 SUPERFAMILY Protein kinase-like (PK-like) 375 656 IPR011009 -
Phac9g00970 702 SUPERFAMILY EGF/Laminin 262 292 - -
Phac9g00970 702 CDD EGF_CA 262 295 - -
Phac9g00970 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Phac9g00970 702 Pfam Calcium-binding EGF domain 262 291 IPR001881 GO:0005509
Phac9g00970 702 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 651 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00970 Phac-Chr9 7442219 7444990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00970 27 686 Receptor kinase-like Gene Family AT1G21230 42.113 8.30e-171 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phac9g00970 Pkinase 2.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00970 - - var:108330433 1249.57