Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00948 ATGATTGAGATGGGGTCGTGTGGGAGATCTGTTACCGCTACTGATCGCTCTGGAGGGTCTGTTATCGAGCAGCATTTGTGCTCAGAGGTTGCGGAGCAGGTTGTTTCTGCACAGGAGTCTTGTTTGGAAGAGGCCTGCAATGTTGTGGACTCTAATGCTGACCTCTCCACTGTGACTGATGGTTGTGTGGGAGAGGACCTTGTGGGTTCTGCAAGGTGTCTAGGTGAGGGGTCTTGCGATGCTTTGGGTTTGGCAAGTGAATGTGAAAATGCTGATTTGTTGTCACTGGAGAAAACCACCGAAGATGATTGTCTGAATTGTTTGGGGGTTTCTTACGGGGGCATTGAAGTTCCCTGTGAAAGCGGTGTCTTTGAGGGGAATGTTCAGGGTGAGGGAAACTTTGATTTGCGGTCACGGTCTTTGACCACTGATGATTCACAGAGGCTTTGTGCTCAACAATCACCTGCTACAGGAAATCATTCCGTCGTTGTTGAAGGAGAAATCGATGACACTGGTCTTGGTGATGCTTTCAATCATGTTCTTGATTTCAGGGATTCTGAAATGTCTTTGGAATTAGAATCTGTGGCTGACTTGTTAGTTGATTGCAACCAGCAAAATGAGCAGCAGGAAATCATGAGAAATGCAGACCCCTTGTTGAATGTTGTGGAAAATTGTGATGCTTTAATTGGGACTGAAGCTGATGCTTGCAGGCAGATATCTCCTACCCTGGATATGGAAGTGCCATCTGGTGCGTTATGTGCAGATACAGAAGTAGAGAGCACAAGTGATCTGAAAGATGGTGAGGACCAGAATAGTACTTGCGAAGAAAAGGTTAAAGTTTTTGCTGATGAAGAAATCATTTTCATTAATTCATGTGTAAAAATATCTTCCTCTCCAGGTTGCCATGGGACTGTTGACTGCTCATCTGTAGATTCTCCTTGTGAGCCTGCCTTGTTGGATGCAGGGCGTGAAATGAAGAATGATGTACTACAAATAGAAGATGCTTTCTGTAAATTGAAGGACTGTTCCTCAGAGGAAACTAGCAACTCTACCTTTAGAAAGCCGTCTTCTCCAGAATCAGGCCTGCCCTCTGTTGCTTCAATTGCCAACTGCTCTTCAAAGGATGTTTCTAATCTCCATTGTAATGGTGATGATGTTTCTACTACCACTACTATTGCTACTAATAATGCTGTGGACGATCTGGGGCAGATGGATAATGATGGAAAAGAAGCAGTTGAAGTTGATTGTATCACTGAAAGCATTCCATTACTTTCTCAAAGGAATAGTCGAAGAAGTAAAGTAGGCCGTAAGACACAAACTAAAAAGGCTTCAAGAAGAGGCAAAAACAAAACCAAGGTGACACGTCCAAATGGGGATTATATGAAGTTAAACTCAGAGGCTGCCAGAAAGAAAAGAAGTTGTTTCTCCAAACCAGCTCGTTCTTCTATCTGGGGATCAATTGGGAATATTGAACAGTTTTTTGAGCAAGATAATGAGCGTGTAGTTGGTGAAGCTGTGTGCCAAGAATTGGGGAAGGCTAGAAGCAAGCGTCAAAGTGGGAAAGCAGTTAAGAATAAAGCAAGTACTGGCTCACTGAGTTCAGTACAGAAGTGTCCTATTTCAACCTCTCGTGTTCGTCTAAAGATCAAATTTGGGAAAGAACCTGATTTAAGTTGCTCAAATCTCTTGTCTCCAGACTCTGTTGATGGCTTGGCTTCTGCTTCCCACTTGGAGTCTGGTTCAGCTTCTGAGAAAATAGCCTGCAATCTCGAAGATAAAATGTTGAAAGTGGTGACATTGGGCAATTCAGAATCTTTCAACAATGACGTGGATAAGGATGATCTTGTTCGAAATGAACAAGTGGCTAATAGCCCCTTAGAAGAAAATACTGAAATAACAGGGAAGGCAGATGGGGATGTAGAGGAACATTGTCTTGCAGCTCCTCCAGAGAAGGTGGTTGAAGCTTTGATTGAACCTATCAATAACAAGGGTATGGATCCTGGAACTTCACCTGATTCTGAAGTTATCAATTCAATTCCTGAAATCCAGGTTGTAGAGAGACATCAAGAAGATTTACATGATGCTGTTTTAGGTTCTTCTAAAGAGTTAAATTCTAAATTGGATGCTACCATCAGTAGAAGAGGGAAGAAGAAAGACAAACTTATCTGTTCAGGTATTTGTATCGCTGAAGATGAATGTCAAGGTCCGCCTAGAAACAGTAGAGGTAAGCAGTCAAAGAACCGCAGGGGTAAGAAAAATTGTAGGGATGCAGTTAGCTCTTTGGAATTGTCTACTTTCACTCAGATGAGAAAATCTGTGAGCAGTAAAGAATTGTGCCCAGAATCATTCTCCGTTTCTGGAGAGACTGAACTTGGAGGCTCGTCTGAGGCTTTGGAAGTTAAAAATGACATGGACATTAAGATAAGTGGAAAACCATCAGTTGACAATGGATTTTCAGAATCTCAAGTTACTGAAAATATGCTGTCTTCTGCAAGACCTTTGGGTCGTAAACTACCTAAAAGTCTTCGACCTAGTAAAGTTAGTAGGACCAAATTTAAAGCTTCTGACTCGGCTGACAGGAAAAAGACTACATGTACACGCAAGGAGAAACAGAAAAAGCCAATTAAGAAGTCTGAAGTCAAGAGAAAAGGTGCCTCTCTTAAAATTACATGTGAAATGGAAGATCACCCACATGCAGTTGCAAATATTGGAAATTATAAGTTGGATGCTGTTGGAAAAATTAATGCTGAGGACAACAAAGTATCAGTCAACATATCTAAATTAGACATGCTGTCTGGTGTTGAACTGGGTGGGCAACTTCCATCTCCCCGTAATGCGTGGGTGCGATGTGATGATTGTTACAAGTGGAGGCGAATTCCAGCTGTGCTTGCAGACCTAATTGATGAAACTAACCGTACCTGGACATGTAAGGACAGCAGTGATAGTGCCTTTGCTGACTGTGCTGTCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCAGAGTTGGGATTATCAGATGCCTCCGGTGAAGAAGATGCATATGAAGGCTCCAAAAATTTTAAGGAATTAGAATATCGGCCTCCATTTGTTTCCCAGGGGTCAACTTTTACCCATATTTTCACCAATGAATTCCTACATCGTAGCCATAAAACTCAGACTATTGATGAGATAATGGTCTGTCATTGCAAGGCGTCTCAAGAAGGAAAGTTGGGCTGTGGTGATGAATGCCTAAATCGGATGCTTAATATTGAATGTGTACAAGGAACATGCCCGTGTGGGGACCGTTGTTCTAACCAGCAGTTCCAAAAACGCAAGTATGCTAATCTGAGGTGGTTTAAATGTGGGAAAAAGGGATATGGTCTAAAGGCACTTGGGAATGTAGCTCAAGGCCAGTTTCTTATTGAATACGTTGGAGAGGTGCTTGATATGCATACGTATGAGGCGCGGCAAAGGGAATACGCTTTGAAGGGTCATCGACATTTCTATTTTATGACCTTGAATGGCAGTGAGGTAATAGATGCTAGTGCGAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACCGAAAAGTGGATGGTGAATGGGGAGATCTGTATTGGACTGTTTGCATTGCGGGATATTAAGCAGGATGAAGAATTGACGTTTGACTACAACTATGTAAGGGTTTTTGGTGCTGCTGCAAAAAAATGTTATTGTAGTTCACCTAGTTGTCGAGGTTATATAGGTGGCGGTGATCCACTTAATGCTGACCTGATAGTTCAAAGTGATTCAGAAGAAGAATTTCCAGAACCTGTTATGCTTACCAAGGATGGTGAAATTGAAGATGCTGTACCCATACCCAAGTATTTTAGTAATGTTGATACACAGTCTGCCAGAAATATGTTAAAAGGCAGGGATATATTGGAAAAGTCTACAACTGCTATAGATTCGGATGGTTCTCCAGAGAAAGAAAGTTCCGTGAACCCTGCCTCTGCTGTTTCTCTGTTGCACAGCCCAGCAGAAATGGAGGATTCGAAGGGCAAGTTACCTTTTTCTGTTGAAGTTGAAGAAATTTCTCAACAAATGGAGGATGTAACAAGCAAACCCATGCTCACCGTACAAGAATATGAAAAGGAAAAGGAATCAGAGTTTGCAGACAAAACTTCCTCCACTCAAAGATTAGAGACTACTTCTCCCCTTACAACTGCTAGCAAAATGTTATCTAATTCTACTGGTAGTAATAGGGAGTCCAAATCTGAAATAATTGAAGGCAGGAAGAATCCTAAGTTAAAGAGTTCTGTTAAAAAAGGAAAGGTTCATGCTAATCTTCCAAATGGCCTTAAAGCTGAGGTGACAGCCAATCGATTGCAGTTGTCATCTGTTAAACACAAAAAAGTAGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTCAATGAGTTGCTGGATGGAGATGGGGGAATAAGCAAAAGAAAGGACGCTACCAAAGGGTACTTGAAGCTTTTGTTTCTCACTGTGGCATCTGGTGATAGAAGCAACGGTGAAGCAATTCAAAGTAATCGAGATCTTTCCATGATACTTGATGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACATAACATTATGAAGCAGTACAGGCAGGACTTCAAAAAAATTCCAATACTGCGAAAGCTTCTTAAGGTCTTAGAGTACCTAGCAGCAAGCAAAATTTTGACACCTGAACAGATTAATGGTGGTCCTCCTTGTCATGGAATGGAGAGCTTTAGAGAGTCTATGCTTTCTCTGACAGAGCATGATGACAAGCAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGTTTCCCAGACCCAACAGAAAACATGGCTATTTGGACAGGGATGATAATAGAATGGAATCTCACAGAAGTTTCAGTGGTAACAGATTTTCAGCATCACACAGTCATAGACCTGAGCAGGATTTAAGGGCTGCAGAAGTAATTGACTGCAGTCAGCAGTCTATGCTCGGGACAACTCCAGTAGATGCTGATACCCGGGAAAGCTGTCCTGCCCACTCTCTAGATGGGGTTGAAATCAAAGGAGCTAAAAAACGGAAGCGCAAAAGCCGATGGGATCAACCGGCAGAGACAAACTCACTTTCTGATGCCGTTATGAGCTCCATTGGTGAAAGCCAGAACATTCATGAGGATGTTCCACCAGGATTTTCGTGTCCAATAGGTCCATTAAATGCTTCTGCCCTAAACTCTGGTAATCTTGTATTGCAAAATGCAAGCCGTTCTGGATGTCCCTCTGATTTAGTAGTTGGTCATTCGAAAAGGAAATTTAATTCTCGCTTGCCTGTGGCATATGGAATGCCATGGTCTGTTGCCCACCAATATGGAACACCTCATACTGAATTTCCAGAGCGTTGGGTCACTGCACCTGGCATACCTTTCATTCCATTTCCTCCACTACCCCCATATCCTCGGGACAACAAAGACTGTCAACCTTCTAATAATAATAGTGCTATGATAATTGATCTGCCTGCTGAAGCTATGATAAGTGATCAGTCTGCTGAAGTTAAGGAGGGTCATAACAGTAGTATGGTCAGTTGTTGTGCAGATGATATGATTCCCAGCACAACTGGTGCTAACCCTGAAGAGTCAAACCTTCTGTTCGAGGAAAACGAAGCTAAACGAATGAAGGGTGACTCCCATGATTTGGTAAGGAAGTATTATAAACAGCAGAAATGGAATAACTCGAAAATACATCGACCATGGTTCCAGAGGAATGCATGGAAATGTAATGAGAACAACTCTAATGGTGATATGTGCAGTATAGATGTAGATTTACCGAAAGAGTCGGAAGATACTTGTGATGCGGAGAATGCAATCTGTAGAGAGGAGAAAGGTGGTAATAATATTTATTAG 5955 0.4202 MIEMGSCGRSVTATDRSGGSVIEQHLCSEVAEQVVSAQESCLEEACNVVDSNADLSTVTDGCVGEDLVGSARCLGEGSCDALGLASECENADLLSLEKTTEDDCLNCLGVSYGGIEVPCESGVFEGNVQGEGNFDLRSRSLTTDDSQRLCAQQSPATGNHSVVVEGEIDDTGLGDAFNHVLDFRDSEMSLELESVADLLVDCNQQNEQQEIMRNADPLLNVVENCDALIGTEADACRQISPTLDMEVPSGALCADTEVESTSDLKDGEDQNSTCEEKVKVFADEEIIFINSCVKISSSPGCHGTVDCSSVDSPCEPALLDAGREMKNDVLQIEDAFCKLKDCSSEETSNSTFRKPSSPESGLPSVASIANCSSKDVSNLHCNGDDVSTTTTIATNNAVDDLGQMDNDGKEAVEVDCITESIPLLSQRNSRRSKVGRKTQTKKASRRGKNKTKVTRPNGDYMKLNSEAARKKRSCFSKPARSSIWGSIGNIEQFFEQDNERVVGEAVCQELGKARSKRQSGKAVKNKASTGSLSSVQKCPISTSRVRLKIKFGKEPDLSCSNLLSPDSVDGLASASHLESGSASEKIACNLEDKMLKVVTLGNSESFNNDVDKDDLVRNEQVANSPLEENTEITGKADGDVEEHCLAAPPEKVVEALIEPINNKGMDPGTSPDSEVINSIPEIQVVERHQEDLHDAVLGSSKELNSKLDATISRRGKKKDKLICSGICIAEDECQGPPRNSRGKQSKNRRGKKNCRDAVSSLELSTFTQMRKSVSSKELCPESFSVSGETELGGSSEALEVKNDMDIKISGKPSVDNGFSESQVTENMLSSARPLGRKLPKSLRPSKVSRTKFKASDSADRKKTTCTRKEKQKKPIKKSEVKRKGASLKITCEMEDHPHAVANIGNYKLDAVGKINAEDNKVSVNISKLDMLSGVELGGQLPSPRNAWVRCDDCYKWRRIPAVLADLIDETNRTWTCKDSSDSAFADCAVPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEYRPPFVSQGSTFTHIFTNEFLHRSHKTQTIDEIMVCHCKASQEGKLGCGDECLNRMLNIECVQGTCPCGDRCSNQQFQKRKYANLRWFKCGKKGYGLKALGNVAQGQFLIEYVGEVLDMHTYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEELTFDYNYVRVFGAAAKKCYCSSPSCRGYIGGGDPLNADLIVQSDSEEEFPEPVMLTKDGEIEDAVPIPKYFSNVDTQSARNMLKGRDILEKSTTAIDSDGSPEKESSVNPASAVSLLHSPAEMEDSKGKLPFSVEVEEISQQMEDVTSKPMLTVQEYEKEKESEFADKTSSTQRLETTSPLTTASKMLSNSTGSNRESKSEIIEGRKNPKLKSSVKKGKVHANLPNGLKAEVTANRLQLSSVKHKKVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRQDFKKIPILRKLLKVLEYLAASKILTPEQINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWFPRPNRKHGYLDRDDNRMESHRSFSGNRFSASHSHRPEQDLRAAEVIDCSQQSMLGTTPVDADTRESCPAHSLDGVEIKGAKKRKRKSRWDQPAETNSLSDAVMSSIGESQNIHEDVPPGFSCPIGPLNASALNSGNLVLQNASRSGCPSDLVVGHSKRKFNSRLPVAYGMPWSVAHQYGTPHTEFPERWVTAPGIPFIPFPPLPPYPRDNKDCQPSNNNSAMIIDLPAEAMISDQSAEVKEGHNSSMVSCCADDMIPSTTGANPEESNLLFEENEAKRMKGDSHDLVRKYYKQQKWNNSKIHRPWFQRNAWKCNENNSNGDMCSIDVDLPKESEDTCDAENAICREEKGGNNIY* 1985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00948 1984 SUPERFAMILY SET domain 1035 1245 IPR046341 -
Phac9g00948 1984 Pfam CW-type Zinc Finger 947 993 IPR011124 GO:0008270
Phac9g00948 1984 MobiDBLite consensus disorder prediction 1310 1330 - -
Phac9g00948 1984 MobiDBLite consensus disorder prediction 1377 1436 - -
Phac9g00948 1984 Gene3D SET domain 1004 1256 IPR046341 -
Phac9g00948 1984 MobiDBLite consensus disorder prediction 1687 1729 - -
Phac9g00948 1984 MobiDBLite consensus disorder prediction 849 865 - -
Phac9g00948 1984 MobiDBLite consensus disorder prediction 427 457 - -
Phac9g00948 1984 SMART set_7 1107 1230 IPR001214 GO:0005515
Phac9g00948 1984 MobiDBLite consensus disorder prediction 1696 1710 - -
Phac9g00948 1984 MobiDBLite consensus disorder prediction 1312 1330 - -
Phac9g00948 1984 ProSiteProfiles Post-SET domain profile. 1232 1248 IPR003616 -
Phac9g00948 1984 MobiDBLite consensus disorder prediction 814 829 - -
Phac9g00948 1984 MobiDBLite consensus disorder prediction 733 755 - -
Phac9g00948 1984 FunFam Histone-lysine N-methyltransferase 1006 1263 - -
Phac9g00948 1984 ProSiteProfiles SET domain profile. 1107 1224 IPR001214 GO:0005515
Phac9g00948 1984 SMART shorttest3 1055 1106 IPR006560 GO:0005634|GO:0042054
Phac9g00948 1984 Pfam AWS domain 1070 1104 IPR006560 GO:0005634|GO:0042054
Phac9g00948 1984 MobiDBLite consensus disorder prediction 809 881 - -
Phac9g00948 1984 Pfam SET domain 1118 1224 IPR001214 GO:0005515
Phac9g00948 1984 CDD SET_SETD2 1106 1248 IPR044437 GO:0010452|GO:0046975
Phac9g00948 1984 ProSiteProfiles AWS domain profile. 1055 1105 IPR006560 GO:0005634|GO:0042054
Phac9g00948 1984 ProSiteProfiles Zinc finger CW-type profile. 941 995 IPR011124 GO:0008270
Phac9g00948 1984 MobiDBLite consensus disorder prediction 346 365 - -
Phac9g00948 1984 MobiDBLite consensus disorder prediction 430 451 - -
Phac9g00948 1984 MobiDBLite consensus disorder prediction 1388 1416 - -
Phac9g00948 1984 FunFam Histone-lysine N-methyltransferase 939 1000 - -
Phac9g00948 1984 Gene3D - 939 1000 - -
Phac9g00948 1984 PANTHER SET DOMAIN PROTEINS 444 1725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00948 Phac-Chr9 7243424 7259180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00948 1090 1247 C2H2 Transcription Factor Family AT2G23740 32.044 7.82e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac9g00948 SET 8.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00948 - - gmx:100795379 2947.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00948 9 7243424 7259180 Phac9g00948 9 7243424 7259180 ECH