Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac9g00947 | ATGATTGAGATGGGGTCGTGTGGGAGATCTGTTACCGCTACTGATCGCTCTGGAGGGTCTGTTATCGAGCAGCATTTGTGCTCAGAGGTTGCGGAGCAGGTTGTTTCTGCACAGGAGTCTTGTTTGGAAGAGGCCTGCAATGTTGTGGACTCTAATGCTGACCTCTCCACTGTGACTGATGGTTGTGTGGGAGAGGACCTTGTGGGTTCTGCAAGGTGTCTAGGTGAGGGGTCTTGCGATGCTTTGGGTTTGGCAAGTGAATGTGAAAATGCTGATTTGTTGTCACTGGAGAAAACCACCGAAGATGATTGTCTGAATTGTTTGGGGGTTTCTTACGGGGGCATTGAAGTTCCCTGTGAAAGCGGTGTCTTTGAGGGGAATGTTCAGGGTGAGGGAAACTTTGATTTGCGGTCACGGTCTTTGACCACTGATGATTCACAGAGGCTTTGTGCTCAACAATCACCTGCTACAGGAAATCATTCCGTCGTTGTTGAAGGAGAAATCGATGACACTGGTCTTGGTGATGCTTTCAATCATGTTCTTGATTTCAGGGATTCTGAAATGTCTTTGGAATTAGAATCTGTGGCTGACTTGTTAGTTGATTGCAACCAGCAAAATGAGCAGCAGGAAATCATGAGAAATGCAGACCCCTTGTTGAATGTTGTGGAAAATTGTGATGCTTTAATTGGGACTGAAGCTGATGCTTGCAGGCAGATATCTCCTACCCTGGATATGGAAGTGCCATCTGGTGCGTTATGTGCAGATACAGAAGTAGAGAGCACAAGTGATCTGAAAGATGGTGAGGACCAGAATAGTACTTGCGAAGAAAAGGTTAAAGTTTTTGCTGATGAAGAAATCATTTTCATTAATTCATGTGTAAAAATATCTTCCTCTCCAGGTTGCCATGGGACTGTTGACTGCTCATCTGTAGATTCTCCTTGTGAGCCTGCCTTGTTGGATGCAGGGCGTGAAATGAAGAATGATGTACTACAAATAGAAGATGCTTTCTGTAAATTGAAGGACTGTTCCTCAGAGGAAACTAGCAACTCTACCTTTAGAAAGCCGTCTTCTCCAGAATCAGGCCTGCCCTCTGTTGCTTCAATTGCCAACTTCTCTTCAAAGGATGTTTCTGATCTCCATTGTAAGGGTGATGATGTGGGCAACTCTACCTTTAGAAAGCCATCTTCTCCAGAATCAGGCCTGCCCTCTGTTGCTTCAATTGCCAACTGCTCTTCAAAGGATGTTTCTAATCTCCATTGTAATGGTGATGATGTTTCTACTACCACTACTATTGCTACTAATAATGCTGTGGACGATCTGGGGCAGATGGATAATGATGGAAAAGAAGCAGTTGAAGTTGATTGTATCACTGAAAGCATTCCATTACTTTCTCAAAGGAATAGTCGAAGAAGTAAAGTAGGCCGTAAGACACAAACTAAAAAGGCTTCAAGAAGAGGCAAAAACAAAACCAAGGTGACACGTCCAAATGGGGATTATATGAAGTTAAACTCAGAGGCTGCCAGAAAGAAAAGAAGTTGTTTCTCCAAACCAGCTCGTTCTTCTATCTGGGGATCAATTGGGAATATTGAACAGTTTTTTGAGCAAGATAATGAGCGTGTAGTTGGTGAAGCTGTGTGCCAAGAATTGGGGAAGGCTAGAAGCAAGCGTCAAAGTGGGAAAGCAGTTAAGAATAAAGCAAGTACTGGCTCACTGAGTTCAGTACAGAAGTGTCCTATTTCAACCTCTCGTGTTCGTCTAAAGATCAAATTTGGGAAAGAACCTGATTTAAGTTGCTCAAATCTCTTGTCTCCAGACTCTGTTGATGGCTTGGCTTCTGCTTCCCACTTGGAGTCTGGTTCAGCTTCTGAGAAAATAGCCTGCAATCTCGAAGATAAAATGTTGAAAGTGGTGACATTGGGCAATTCAGAATCTTTCAACAATGACGTGGATAAGGATGATCTTGTTCGAAATGAACAAGTGGCTAATAGCCCCTTAGAAGAAAATACTGAAATAACAGGGAAGGCAGATGGGGATGTAGAGGAACATTGTCTTGCAGCTCCTCCAGAGAAGGTGGTTGAAGCTTTGATTGAACCTATCAATAACAAGGGTATGGATCCTGGAACTTCACCTGATTCTGAAGTTATCAATTCAATTCCTGAAATCCAGGTTGTAGAGAGACATCAAGAAGATTTACATGATGCTGTTTTAGGTTCTTCTAAAGAGTTAAATTCTAAATTGGATGCTACCATCAGTAGAAGAGGGAAGAAGAAAGACAAACTTATCTGTTCAGGTATTTGTATCGCTGAAGATGAATGTCAAGGTCCGCCTAGAAACAGTAGAGGTAAGCAGTCAAAGAACCGCAGGGGTAAGAAAAATTGTAGGGATGCAGTTAGCTCTTTGGAATTGTCTACTTTCACTCAGATGAGAAAATCTGTGAGCAGTAAAGAATTGTGCCCAGAATCATTCTCCGTTTCTGGAGAGACTGAACTTGGAGGCTCGTCTGAGGCTTTGGAAGTTAAAAATGACATGGACATTAAGATAAGTGGAAAACCATCAGTTGACAATGGATTTTCAGAATCTCAAGTTACTGAAAATATGCTGTCTTCTGCAAGACCTTTGGGTCGTAAACTACCTAAAAGTCTTCGACCTAGTAAAGTTAGTAGGACCAAATTTAAAGCTTCTGACTCGGCTGACAGGAAAAAGACTACATGTACACGCAAGGAGAAACAGAAAAAGCCAATTAAGAAGTCTGAAGTCAAGAGAAAAGGTGCCTCTCTTAAAATTACATGTGAAATGGAAGATCACCCACATGCAGTTGCAAATATTGGAAATTATAAGTTGGATGCTGTTGGAAAAATTAATGCTGAGGACAACAAAGTATCAGTCAACATATCTAAATTAGACATGCTGTCTGGTGTTGAACTGGGTGGGCAACTTCCATCTCCCCGTAATGCGTGGGTGCGATGTGATGATTGTTACAAGTGGAGGCGAATTCCAGCTGTGCTTGCAGACCTAATTGATGAAACTAACCGTACCTGGACATGTAAGGACAGCAGTGATAGTGCCTTTGCTGACTGTGCTGTCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCAGAGTTGGGATTATCAGATGCCTCCGGTGAAGAAGATGCATATGAAGGCTCCAAAAATTTTAAGGAATTAGAATATCGGCCTCCATTTGTTTCCCAGGGGTCAACTTTTACCCATATTTTCACCAATGAATTCCTACATCGTAGCCATAAAACTCAGACTATTGATGAGATAATGGTCTGTCATTGCAAGGCGTCTCAAGAAGGAAAGTTGGGCTGTGGTGATGAATGCCTAAATCGGATGCTTAATATTGAATGTGTACAAGGAACATGCCCGTGTGGGGACCGTTGTTCTAACCAGCAGTTCCAAAAACGCAAGTATGCTAATCTGAGGTGGTTTAAATGTGGGAAAAAGGGATATGGTCTAAAGGCACTTGGGAATGTAGCTCAAGGCCAGTTTCTTATTGAATACGTTGGAGAGGTGCTTGATATGCATACGTATGAGGCGCGGCAAAGGGAATACGCTTTGAAGGGTCATCGACATTTCTATTTTATGACCTTGAATGGCAGTGAGGTAATAGATGCTAGTGCGAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACCGAAAAGTGGATGGTGAATGGGGAGATCTGTATTGGACTGTTTGCATTGCGGGATATTAAGCAGGATGAAGAATTGACGTTTGACTACAACTATGTAAGGGTTTTTGGTGCTGCTGCAAAAAAATGTTATTGTAGTTCACCTAGTTGTCGAGGTTATATAGGTGGCGGTGATCCACTTAATGCTGACCTGATAGTTCAAAGTGATTCAGAAGAAGAATTTCCAGAACCTGTTATGCTTACCAAGGATGGTGAAATTGAAGATGCTGTACCCATACCCAAGTATTTTAGTAATGTTGATACACAGTCTGCCAGAAATATGTTAAAAGGCAGGGATATATTGGAAAAGTCTACAACTGCTATAGATTCGGATGGTTCTCCAGAGAAAGAAAGTTCCGTGAACCCTGCCTCTGCTGTTTCTCTGTTGCACAGCCCAGCAGAAATGGAGGATTCGAAGGGCAAGTTACCTTTTTCTGTTGAAGTTGAAGAAATTTCTCAACAAATGGAGGATGTAACAAGCAAACCCATGCTCACCGTACAAGAATATGAAAAGGAAAAGGAATCAGAGTTTGCAGACAAAACTTCCTCCACTCAAAGATTAGAGACTACTTCTCCCCTTACAACTGCTAGCAAAATGTTATCTAATTCTACTGGTAGTAATAGGGAGTCCAAATCTGAAATAATTGAAGGCAGGAAGAATCCTAAGTTAAAGAGTTCTGTTAAAAAAGGAAAGGTTCATGCTAATCTTCCAAATGGCCTTAAAGCTGAGGTGACAGCCAATCGATTGCAGTTGTCATCTGTTAAACACAAAAAAGTAGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTCAATGAGTTGCTGGATGGAGATGGGGGAATAAGCAAAAGAAAGGACGCTACCAAAGGGTACTTGAAGCTTTTGTTTCTCACTGTGGCATCTGGTGATAGAAGCAACGGTGAAGCAATTCAAAGTAATCGAGATCTTTCCATGATACTTGATGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACATAACATTATGAAGCAGTACAGGCAGGACTTCAAAAAAATTCCAATACTGCGAAAGCTTCTTAAGGTCTTAGAGTACCTAGCAGCAAGCAAAATTTTGACACCTGAACAGATTAATGGTGGTCCTCCTTGTCATGGAATGGAGAGCTTTAGAGAGTCTATGCTTTCTCTGACAGAGCATGATGACAAGCAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGTTTCCCAGACCCAACAGAAAACATGGCTATTTGGACAGGGATGATAATAGAATGGAATCTCACAGAAGTTTCAGTGGTAACAGATTTTCAGCATCACACAGTCATAGACCTGAGCAGGATTTAAGGGCTGCAGAAGTAATTGACTGCAGTCAGCAGTCTATGCTCGGGACAACTCCAGTAGATGCTGATACCCGGGAAAGCTGTCCTGCCCACTCTCTAGATGGGGTTGAAATCAAAGGAGCTAAAAAACGGAAGCGCAAAAGCCGATGGGATCAACCGGCAGAGACAAACTCACTTTCTGATGCCGTTATGAGCTCCATTGGTGAAAGCCAGAACATTCATGAGGATGTTCCACCAGGATTTTCGTGTCCAATAGGTCCATTAAATGCTTCTGCCCTAAACTCTGGTAATCTTGTATTGCAAAATGCAAGCCGTTCTGGATGTCCCTCTGATTTAGTAGTTGGTCATTCGAAAAGGAAATTTAATTCTCGCTTGCCTGTGGCATATGGAATGCCATGGTCTGTTGCCCACCAATATGGAACACCTCATACTGAATTTCCAGAGCGTTGGGTCACTGCACCTGGCATACCTTTCATTCCATTTCCTCCACTACCCCCATATCCTCGGGACAACAAAGACTGTCAACCTTCTAATAATAATAGTGCTATGATAATTGATCTGCCTGCTGAAGCTATGATAAGTGATCAGTCTGCTGAAGTTAAGGAGGGTCATAACAGTAGTATGGTCAGTTGTTGTGCAGATGATATGATTCCCAGCACAACTGGTGCTAACCCTGAAGAGTCAAACCTTCTGTTCGAGGAAAACGAAGCTAAACGAATGAAGGGTGACTCCCATGATTTGGTAAGGAAGTATTATAAACAGCAGAAATGGAATAACTCGAAAATACATCGACCATGGTTCCAGAGGAATGCATGGAAATGTAATGAGAACAACTCTAATGGTGATATGTGCAGTATAGATGTAGATTTACCGAAAGAGTCGGAAGATACTTGTGATGCGGAGAATGCAATCTGTAGAGAGGAGAAAGGTGGTAATAATATTTATTAG | 6072 | 0.4208 | MIEMGSCGRSVTATDRSGGSVIEQHLCSEVAEQVVSAQESCLEEACNVVDSNADLSTVTDGCVGEDLVGSARCLGEGSCDALGLASECENADLLSLEKTTEDDCLNCLGVSYGGIEVPCESGVFEGNVQGEGNFDLRSRSLTTDDSQRLCAQQSPATGNHSVVVEGEIDDTGLGDAFNHVLDFRDSEMSLELESVADLLVDCNQQNEQQEIMRNADPLLNVVENCDALIGTEADACRQISPTLDMEVPSGALCADTEVESTSDLKDGEDQNSTCEEKVKVFADEEIIFINSCVKISSSPGCHGTVDCSSVDSPCEPALLDAGREMKNDVLQIEDAFCKLKDCSSEETSNSTFRKPSSPESGLPSVASIANFSSKDVSDLHCKGDDVGNSTFRKPSSPESGLPSVASIANCSSKDVSNLHCNGDDVSTTTTIATNNAVDDLGQMDNDGKEAVEVDCITESIPLLSQRNSRRSKVGRKTQTKKASRRGKNKTKVTRPNGDYMKLNSEAARKKRSCFSKPARSSIWGSIGNIEQFFEQDNERVVGEAVCQELGKARSKRQSGKAVKNKASTGSLSSVQKCPISTSRVRLKIKFGKEPDLSCSNLLSPDSVDGLASASHLESGSASEKIACNLEDKMLKVVTLGNSESFNNDVDKDDLVRNEQVANSPLEENTEITGKADGDVEEHCLAAPPEKVVEALIEPINNKGMDPGTSPDSEVINSIPEIQVVERHQEDLHDAVLGSSKELNSKLDATISRRGKKKDKLICSGICIAEDECQGPPRNSRGKQSKNRRGKKNCRDAVSSLELSTFTQMRKSVSSKELCPESFSVSGETELGGSSEALEVKNDMDIKISGKPSVDNGFSESQVTENMLSSARPLGRKLPKSLRPSKVSRTKFKASDSADRKKTTCTRKEKQKKPIKKSEVKRKGASLKITCEMEDHPHAVANIGNYKLDAVGKINAEDNKVSVNISKLDMLSGVELGGQLPSPRNAWVRCDDCYKWRRIPAVLADLIDETNRTWTCKDSSDSAFADCAVPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEYRPPFVSQGSTFTHIFTNEFLHRSHKTQTIDEIMVCHCKASQEGKLGCGDECLNRMLNIECVQGTCPCGDRCSNQQFQKRKYANLRWFKCGKKGYGLKALGNVAQGQFLIEYVGEVLDMHTYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEELTFDYNYVRVFGAAAKKCYCSSPSCRGYIGGGDPLNADLIVQSDSEEEFPEPVMLTKDGEIEDAVPIPKYFSNVDTQSARNMLKGRDILEKSTTAIDSDGSPEKESSVNPASAVSLLHSPAEMEDSKGKLPFSVEVEEISQQMEDVTSKPMLTVQEYEKEKESEFADKTSSTQRLETTSPLTTASKMLSNSTGSNRESKSEIIEGRKNPKLKSSVKKGKVHANLPNGLKAEVTANRLQLSSVKHKKVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRQDFKKIPILRKLLKVLEYLAASKILTPEQINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWFPRPNRKHGYLDRDDNRMESHRSFSGNRFSASHSHRPEQDLRAAEVIDCSQQSMLGTTPVDADTRESCPAHSLDGVEIKGAKKRKRKSRWDQPAETNSLSDAVMSSIGESQNIHEDVPPGFSCPIGPLNASALNSGNLVLQNASRSGCPSDLVVGHSKRKFNSRLPVAYGMPWSVAHQYGTPHTEFPERWVTAPGIPFIPFPPLPPYPRDNKDCQPSNNNSAMIIDLPAEAMISDQSAEVKEGHNSSMVSCCADDMIPSTTGANPEESNLLFEENEAKRMKGDSHDLVRKYYKQQKWNNSKIHRPWFQRNAWKCNENNSNGDMCSIDVDLPKESEDTCDAENAICREEKGGNNIY* | 2024 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 1351 | 1369 | - | - | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 465 | 497 | - | - | |
| Phac9g00947 | 2023 | ProSiteProfiles | Post-SET domain profile. | 1271 | 1287 | IPR003616 | - | |
| Phac9g00947 | 2023 | Gene3D | SET domain | 1043 | 1295 | IPR046341 | - | |
| Phac9g00947 | 2023 | ProSiteProfiles | Zinc finger CW-type profile. | 980 | 1034 | IPR011124 | GO:0008270 | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 469 | 490 | - | - | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 1726 | 1768 | - | - | |
| Phac9g00947 | 2023 | PANTHER | SET DOMAIN PROTEINS | 483 | 1764 | - | - | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 888 | 904 | - | - | |
| Phac9g00947 | 2023 | ProSiteProfiles | AWS domain profile. | 1094 | 1144 | IPR006560 | GO:0005634|GO:0042054 | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 1427 | 1455 | - | - | |
| Phac9g00947 | 2023 | CDD | SET_SETD2 | 1145 | 1287 | IPR044437 | GO:0010452|GO:0046975 | |
| Phac9g00947 | 2023 | Pfam | CW-type Zinc Finger | 986 | 1032 | IPR011124 | GO:0008270 | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 1416 | 1469 | - | - | |
| Phac9g00947 | 2023 | Gene3D | - | 978 | 1039 | - | - | |
| Phac9g00947 | 2023 | FunFam | Histone-lysine N-methyltransferase | 1045 | 1302 | - | - | |
| Phac9g00947 | 2023 | SMART | shorttest3 | 1094 | 1145 | IPR006560 | GO:0005634|GO:0042054 | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 1349 | 1369 | - | - | |
| Phac9g00947 | 2023 | Pfam | SET domain | 1157 | 1263 | IPR001214 | GO:0005515 | |
| Phac9g00947 | 2023 | SUPERFAMILY | SET domain | 1074 | 1284 | IPR046341 | - | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 849 | 920 | - | - | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 772 | 794 | - | - | |
| Phac9g00947 | 2023 | Pfam | AWS domain | 1109 | 1143 | IPR006560 | GO:0005634|GO:0042054 | |
| Phac9g00947 | 2023 | FunFam | Histone-lysine N-methyltransferase | 978 | 1039 | - | - | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 346 | 365 | - | - | |
| Phac9g00947 | 2023 | SMART | set_7 | 1146 | 1269 | IPR001214 | GO:0005515 | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 853 | 868 | - | - | |
| Phac9g00947 | 2023 | ProSiteProfiles | SET domain profile. | 1146 | 1263 | IPR001214 | GO:0005515 | |
| Phac9g00947 | 2023 | MobiDBLite | consensus disorder prediction | 1735 | 1749 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac9g00947 | Phac-Chr9 | 7243424 | 7259180 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac9g00947 | 1129 | 1286 | C2H2 Transcription Factor Family | AT2G23740 | 32.044 | 7.55e-19 | 92.0 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | SET | Phac9g00947 | SET | 8.6e-18 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac9g00947 | - | - | gmx:100795379 | 2924.42 |