Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00921 ATGGATGTAGTTTGCAGCATGAGCTTATTGAGGTCTTCTGCAATATACAACTTTGTAACAAATTATCCTGCACTGCGATGGATGCCATGTCAGAGTTGGGGCTTCCTTCGATGGCCGGGTCTTGACGGATTCCTTCGGCTTTTGGTCGTCGGACTTCTCTGGTCCACGTTCTCCGAGCTTCGCTTCATACCCTCCTCTTCCATGTTCCCCACCCTTCGTGTTGGTGATCGAATTATTGTGGAAAAGGCTTCATATTATATCAAGAATCCTTCTATACATGATATTGTAACATTTAAGGATCCAACACAGTTATATGGAGAAAACACAGAAACTGTTTTTATTAAGAGAATTGTAGCAAAAGCAGGAGACGCTGTTGAGGTTCATGATGGGGTACTCTACATCAATGGTGTTGCTCAGCAGGAAGATTTTATAGCACAACCACCAACATACACAATCCCATTAACTACTGTGCCCAAGGGCCATGTTTATGTGCTAGGGGATAATCGTAATAATAGTTATGATTCTCATGTGTGGTAA 537 0.4246 MDVVCSMSLLRSSAIYNFVTNYPALRWMPCQSWGFLRWPGLDGFLRLLVVGLLWSTFSELRFIPSSSMFPTLRVGDRIIVEKASYYIKNPSIHDIVTFKDPTQLYGENTETVFIKRIVAKAGDAVEVHDGVLYINGVAQQEDFIAQPPTYTIPLTTVPKGHVYVLGDNRNNSYDSHVW* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00921 178 PRINTS Bacterial leader peptidase 1 (S26A) family signature 157 176 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00921 178 PRINTS Bacterial leader peptidase 1 (S26A) family signature 56 72 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00921 178 PRINTS Bacterial leader peptidase 1 (S26A) family signature 113 125 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00921 178 PANTHER SIGNAL PEPTIDASE I 43 178 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00921 178 ProSitePatterns Signal peptidases I signature 3. 162 175 IPR019758 GO:0004252|GO:0016020
Phac9g00921 178 Pfam Signal peptidase, peptidase S26 45 178 IPR019533 GO:0004252|GO:0006465
Phac9g00921 178 SUPERFAMILY LexA/Signal peptidase 57 178 IPR036286 -
Phac9g00921 178 Gene3D Umud Fragment, subunit A 65 178 - -
Phac9g00921 178 NCBIfam signal peptidase I 47 177 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00921 178 CDD S26_SPase_I 59 178 IPR019533 GO:0004252|GO:0006465
Phac9g00921 178 ProSitePatterns Signal peptidases I serine active site. 65 72 IPR019756 GO:0004252|GO:0016020
Phac9g00921 178 FunFam Peptidase/ serine-type peptidase 65 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00921 Phac-Chr9 7020548 7024283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00921 68 176 MADS-box Gene Family AT1G29960 33.636 4.25e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00921 K03100 - gmx:100306121 301.982