Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00919 ATGAGCTTATTGAGGTCTTCTGCAATATACAACTTTGTAACAAATTATCCTGCACTGCGATGGATGCCATGTCAGAGTTGGGGCTTCCTTCGATGGCCGGGTCTTGACGGATTCCTTCGGCTTTTGGTCGTCGGACTTCTCTGGTCCACGTTCTCCGAGCTTCGCTTCATACCCTCCTCTTCCATGTTCCCCACCCTTCGTGTTGGTGATCGAATTATTGTGGAAAAGGCTTCATATTATATCAAGAATCCTTCTATACATGATATTGTAACATTTAAGGATCCAACACAGTTATATGGAGAAAACACAGAAACTGTTTTTATTAAGAGAATTGTAGCAAAAGCAGGAGACGCTGTTGAGGTTCATGATGGGGTACTCTACATCAATGGTGTTGCTCAGCAGGAAGATTTTATAGCACAACCACCAACATACACAATCCCATTAACTACTGTGCCCAAGGGCCATGTTTATGTGCTAGGGGATAATCGTAATAATAGTTATGATTCTCATGTGTGGGGAACACTTCCTATGAAAAACATAATTGGAAGATATGTGACTTGTTATCATAGACCAACAAGCATTTGA 585 0.4154 MSLLRSSAIYNFVTNYPALRWMPCQSWGFLRWPGLDGFLRLLVVGLLWSTFSELRFIPSSSMFPTLRVGDRIIVEKASYYIKNPSIHDIVTFKDPTQLYGENTETVFIKRIVAKAGDAVEVHDGVLYINGVAQQEDFIAQPPTYTIPLTTVPKGHVYVLGDNRNNSYDSHVWGTLPMKNIIGRYVTCYHRPTSI* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00919 194 ProSitePatterns Signal peptidases I signature 3. 156 169 IPR019758 GO:0004252|GO:0016020
Phac9g00919 194 CDD S26_SPase_I 53 183 IPR019533 GO:0004252|GO:0006465
Phac9g00919 194 PRINTS Bacterial leader peptidase 1 (S26A) family signature 50 66 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00919 194 PRINTS Bacterial leader peptidase 1 (S26A) family signature 151 170 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00919 194 PRINTS Bacterial leader peptidase 1 (S26A) family signature 107 119 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00919 194 PANTHER SIGNAL PEPTIDASE I 37 192 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00919 194 FunFam Peptidase/ serine-type peptidase 59 188 - -
Phac9g00919 194 NCBIfam signal peptidase I 41 188 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac9g00919 194 SUPERFAMILY LexA/Signal peptidase 51 188 IPR036286 -
Phac9g00919 194 ProSitePatterns Signal peptidases I serine active site. 59 66 IPR019756 GO:0004252|GO:0016020
Phac9g00919 194 Gene3D Umud Fragment, subunit A 59 191 - -
Phac9g00919 194 Pfam Signal peptidase, peptidase S26 39 186 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00919 Phac-Chr9 7020548 7024283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00919 62 183 MADS-box Gene Family AT1G29960 34.959 3.64e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00919 K03100 - gmx:100306121 341.273