Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00892 ATGGAGTTTGTGGATACCAGAAAACTACAGTTACAACAACTGCAACAACAGCCGCAACCGCAGGAGCAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATTGATAGGAAGCTTTTGGAGAGGCTCCTAAGAGGTTCTTCATGCAAAGTTACCTGCGTGGACTCTGGAGACAAGGCTTTGAAATATCTTGGTTTGGTTGACGACCTTCATGATTCTACTTCTTCAACCTCTTCAGAATCACCATCTTCTCCTCCACCTCAACCATTGCAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTCAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCCGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGAGCAGAAGAGTTTCTGTTGAAGCCTCTTCAGTTATCGGATTTGGATAAGCTTCAGTCATACTTTCTGAAATCCCTTGAAAACTCTTGCGAAAAAGAATCTGCTAACACTAGCATAGATTCCGAGAATGACAATGTCATCATTAACATCAGTAACAGTAACCATATCAATAATAACAATAACAGTATTAGCAAAAGGAAGGCCATATCTGCGGAGTCTCATCAGGAGAGATCAAGACCCAAAATGAAAGAGTTGGCTGTGGTGTAA 705 0.4213 MEFVDTRKLQLQQLQQQPQPQEQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLVDDLHDSTSSTSSESPSSPPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLDKLQSYFLKSLENSCEKESANTSIDSENDNVIINISNSNHINNNNNSISKRKAISAESHQERSRPKMKELAVV* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00892 234 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 220 IPR045279 GO:0009736
Phac9g00892 234 Gene3D - 26 232 - -
Phac9g00892 234 MobiDBLite consensus disorder prediction 214 234 - -
Phac9g00892 234 SMART REC_2 25 165 IPR001789 GO:0000160
Phac9g00892 234 MobiDBLite consensus disorder prediction 215 234 - -
Phac9g00892 234 Pfam Response regulator receiver domain 96 162 IPR001789 GO:0000160
Phac9g00892 234 SUPERFAMILY CheY-like 25 171 IPR011006 -
Phac9g00892 234 CDD REC_typeA_ARR 27 164 - -
Phac9g00892 234 MobiDBLite consensus disorder prediction 72 91 - -
Phac9g00892 234 ProSiteProfiles Response regulatory domain profile. 26 169 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00892 Phac-Chr9 6793719 6797263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00892 22 184 Response Regulator Gene Family AT3G57040 58.788 1.58e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac9g00892 Response_reg 3.4e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00892 K14492 - gmx:100786187 331.257