LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac9g00885	ATGGCAGAGCGTGTGTTCCTCACTCCATCGTCACTGCCTTTACCATCTCAACGCACTCCAACCACAATGGCTCTTTTCAGCGGCGCCGCCTCCGCTCGCATCATTCCTTCCGTCTCACTCTCTTCCTCTTCTCGCTCCTTCTTTTCCCTCTCTTCCTCTTCTCCCTCGCTTCAATGCTTGCGCTCCTCTCCTCGCATTTCGCACCTGTTTCTCAATCAGCGGAGGGCGGAGGTTCGCGTTTCGAGTGGAGGATACGGAACGGTGTCGGCGCCGAAGTCCTTCGCGTCTGATCCTGATCAGTTGAAGAGCGCAAGAGAAGATATCAAGGATCTTCTCAGGTCCAAGTTCTGTCACCCTATTCTGATTCGATTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAATGGCCACAAAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAATTGAGCTGAAACATGCAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTTCAGCCAATCAAAGAGAAATACTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCCACAGCTGTGGAGGAAGCTGGAGGCCCAAAACTCCCTATGAAATATGGAAGAGTGGATGTATCTAAACCTGAACAATGCCCCGAAGAAGGGAGGCTTCCTGATGCTGGGCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCACACACACTGGGACGGTCTAGACCAGATCGTAGTGGTTGGGGAAAGCCTGAGAGTAAATATACAAAAGATGGGCCAGGAGCACCTGGAGGACAATCCTGGACAGTGCAATGGTTGAAATTTGACAACTCTTACTTCAAGGACATTAAAGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGTTCTATTTGAAGACCCATCCTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGACTATGCTGAAGCCCATGCAAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGATGATTCTCCAAATCCAAAGGCAGAGAAGTTTGTAGCAGCCAAATACTCCACTGGAAAGAGAGAGCTATCTGAAGCAATGAAGCAGAAGATACGGGCTGAATATGAGGCCGTTGGTGGAAGCCCAGATAAGCCTCTACAGTCGAACTATTTTCTAAACATCATGATTATTATTGCAGTTTTGGCACTTTTGACATCACTTCTCGGAAACTAG	1311	0.463	MAERVFLTPSSLPLPSQRTPTTMALFSGAASARIIPSVSLSSSSRSFFSLSSSSPSLQCLRSSPRISHLFLNQRRAEVRVSSGGYGTVSAPKSFASDPDQLKSAREDIKDLLRSKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEIELKHAANAGLVNALKLLQPIKEKYSGVTYADLFQLAGATAVEEAGGPKLPMKYGRVDVSKPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPESKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDDSPNPKAEKFVAAKYSTGKRELSEAMKQKIRAEYEAVGGSPDKPLQSNYFLNIMIIIAVLALLTSLLGN*	437

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac9g00885	436	Pfam	Peroxidase	105	336	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Phac9g00885	436	CDD	ascorbate_peroxidase	89	359	-	-
	Phac9g00885	436	ProSiteProfiles	Plant heme peroxidase family profile.	121	405	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Phac9g00885	436	FunFam	L-ascorbate peroxidase S chloroplastic/mitochondrial	104	228	-	-
	Phac9g00885	436	MobiDBLite	consensus disorder prediction	255	287	-	-
	Phac9g00885	436	FunFam	L-ascorbate peroxidase T, chloroplastic	226	349	-	-
	Phac9g00885	436	Gene3D	Peroxidase, domain 2	226	349	-	-
	Phac9g00885	436	PRINTS	Haem peroxidase superfamily signature	288	303	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Phac9g00885	436	PRINTS	Haem peroxidase superfamily signature	198	210	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Phac9g00885	436	PRINTS	Haem peroxidase superfamily signature	180	197	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac9g00885	Phac-Chr9	6678065	6684672	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac9g00885	121	354	Peroxidase	AT2G22420	28.244	2.00e-18	84.0

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac9g00885	K00434		-	csav:115707840	693.345

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