Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00874 ATGGCATCAGAGCTTCAACTGCCCCCGGGCTTCAGATTCCATCCAACTGACGAGGAGCTCGTGATGCACTATCTCTGCCGCAAATGCGCCTCGCAGCCCATCGCCGTTCCCATCATCGCCGAAATCGACCTCTACAAATACGACCCTTGGGACCTTCCCGGATTGGCTTCTTACGGAGAGAAGGAGTGGTACTTCTTTTCACCGCGGGACCGGAAGTACCCGAACGGTTCGAGGCCGAACCGGGCGGCGGGAAGCGGTTACTGGAAGGCAACCGGGGCGGATAAGCCAATTGGTCAGCCGAAAGCGGTTGGGATAAAGAAAGCGTTGGTGTTTTACGCTGGGAAAGCTCCGAAAGGGGACAAAAGCAATTGGATCATGCACGAGTATCGTCTGGCTGATGTAGATCGCTCCGTTCGCAAAAAGAACAGCCTAAGGTTGGATGATTGGGTGCTGTGCCGTATTTACAACAAGAAGGGCACGATCGAGAAATTACAACCGAGCACCGATGTAGTTGTGAGCCGGAAAATCGAATCGCCGGAGATCGAAGAGAAGAAGCCGGAGATTCTGAAAGGCGGAGGAGGTCTTCCGCCGGCAATGACGGATTACATGTACTTCGACCCGTCGGATTCAATCCCGAAGCTGCACACGGACTCGAGCTGTTCGGAGCAGGTGGTTTCGCCGGAATTCGCGAGCGAGGTGCAGAGCGAGCCAAAGTGGAACGAGTGGGAGAAGAGCCTGGAGTTTCCGTATTACATGGATACCAGTCTGAGCAACGGCTTCAGCCAATTCTCGAGCAATAACAATAACAACAGCAACATTCAGATGTCGCCGCTGCAGGACATGTTCATGTACTGGCCAAAGCCCTTTTGA 870 0.5391 MASELQLPPGFRFHPTDEELVMHYLCRKCASQPIAVPIIAEIDLYKYDPWDLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKAVGIKKALVFYAGKAPKGDKSNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTIEKLQPSTDVVVSRKIESPEIEEKKPEILKGGGGLPPAMTDYMYFDPSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKSLEFPYYMDTSLSNGFSQFSSNNNNNSNIQMSPLQDMFMYWPKPF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00874 289 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Phac9g00874 289 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Phac9g00874 289 FunFam NAC transcription factor 16 161 - -
Phac9g00874 289 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Phac9g00874 289 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Phac9g00874 289 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00874 Phac-Chr9 6626850 6630287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00874 1 289 NAC Transcription Factor Family AT1G01720 71.333 2.82e-146 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac9g00874 NAM 3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00874 - - gmx:100805768 489.96