Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00871 ATGGAAGGTGAGGAGGGAAAACAGTGCTCCCACAAAAACCCTTACGTTGAACTAGAAGAAGTTGACTTCGATTTTATTCTAGCATTGAGTATGCAAGAACAACAGAGAGACTTCACAATGCTTTCAACTATTGAAAGTGAAAGTGATGAATATCTAAGTGACTCCTCAATTGATAATGATGATGATGGTGATCCTGACTTCGTAGAGAGCCAAGAGTTTGATACCGACCTTCAGTTTCTTGAAGATGAAGAAAGCAATGATGATGATGAAGAAGAAATGGAAGTCGAAGAAGATGAGATTGATCCAGACGAATTATCTTATGAAGAGTTGATGGAGTTGGGAGAGTTTATAGGAGAAGAAACGAGAGGATTATCAGCAAATGAAATCTCTTTGTGCCTGAACCCTTATACTTACTATTGTGCTGACAGAAAAATTGGAATCGATCGTTGTGTGATTTGTCAGGTTGAATATGAAGATGGTGAAGCACTGGTGGCACTTCAATGTGAGCACCCTTATCATGCAGATTGCATAAGCAAGTGGCTTCAAATTAAGAAGGTTTGTCCAATTTGTAGCAATGAAGTTTCAACTCCAAACATGGCTTCGAACACTTAA 612 0.3873 MEGEEGKQCSHKNPYVELEEVDFDFILALSMQEQQRDFTMLSTIESESDEYLSDSSIDNDDDGDPDFVESQEFDTDLQFLEDEESNDDDEEEMEVEEDEIDPDELSYEELMELGEFIGEETRGLSANEISLCLNPYTYYCADRKIGIDRCVICQVEYEDGEALVALQCEHPYHADCISKWLQIKKVCPICSNEVSTPNMASNT* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00871 203 FunFam E3 ubiquitin ligase BIG BROTHER-related 116 197 - -
Phac9g00871 203 ProSiteProfiles Zinc finger RING-type profile. 150 191 IPR001841 -
Phac9g00871 203 SUPERFAMILY RING/U-box 149 197 - -
Phac9g00871 203 SMART ring_2 150 190 IPR001841 -
Phac9g00871 203 MobiDBLite consensus disorder prediction 44 75 - -
Phac9g00871 203 MobiDBLite consensus disorder prediction 51 75 - -
Phac9g00871 203 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 7 95 IPR043312 -
Phac9g00871 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 203 IPR013083 -
Phac9g00871 203 Pfam Ring finger domain 149 190 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00871 Phac-Chr9 6593686 6595130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00871 85 194 C3H Transcription Factor Family AT3G63530 48.673 5.30e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00871 K19045 - gmx:100526881 320.087