Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00830 ATGGAAATAGACATGGACTACCACACAGATGCAATCCACAGCCTCCACTTCTCTGGATACGCCACCATCACCGACACCACCCCCTCTTCCGACGACGACTACGGTTGCAACTGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCCTTCACCGGACCCCACGATGACTTCCACCACCTCATCGACTCCATCGTCTCCGACGGCGCAACCGCTGAGTACCCCAGCCCCGACGACCACGCTGCCAGCAACTCCCCCTCCCCCTCCATAACGGAGGAAGACGACGCCGAGGAAGAAACAGCCGCCGCCGACGATTCCAAGGGCCTTAGACTAGTCCATCTGCTCATGGCCGCCGCGGAGGCCCTCACCGGAGCCACCAAGAGTCGCGACCTTGCTCGAGTAATATTGGTTCGGCTCAAGGATCTGGTGTCCCACGCGGCGCACGGCTCCAACATGGAAAGGCTCGCCGCCTACTTCACCGACGCACTCCAGGGCCTGCTAGAAGGCGCCGGGGGTGCGCACAATAACAGCAAACATCACTACTACATCACGTGTGGGTCCCAGCACCCCCGCGATGATCATCATCAAAACGACACCCTCGCGGCGTTCCAAATGCTCCAGGACATGTCTCCCTACGTCAAGTTCGGACATTTCACCGCCAACCAGGCCATCCTCGAGGCCGTGGCCCACGAGCGCCGAGTCCACATCGTAGACTACGACATCATGGAAGGGGTCCAGTGGGCTTCTCTCATGCAGGCCCTTGCCTCCAACAAAACAGGTCCACCGGGCCCACACCTCCGAATCACCGCATTGTCCCGAACCGGCACCGGACGCCGCTCCGTCGCTACCGTGCAGGAGACAGGGAGGCGGTTAACGGCGTTCGCCGCTTCCCTAGGGCAGCCGTTCACGTTCCACCAGTGCAGGTTGGATCCCGACGAAACGTTTAAACCTTCGTCTTTGAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGCATGTTAAACTTACCGCACCTGAGTTACCGCGCGCCGGATTCTATTGCGTCGTTTTTGAGTGGGGCGAGAGAGTTGAAGCCGAGGTTGGTGAGTTTGGTGGAGGAAGAGGTGGGGTCCAGTGTGGGAGGGTTCGTGGGAAGGTTCATGGACTTGCTGCATCACTATTCGGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGGCGCGCCAGGGCCCTTGTGGAGCGGGTTTTCTTGGGCCCGAGGATAGTAGGATCGCTGGCCCGGATCTATCGGACGGGTGAAGAGCTGCAGGAGAGAGGGTCGTGGGGGGAGTGGTTGGGTGCGTCGGGGTTCAGGGGAGTCCCCATGAGCTTCGCCAATCATTGCCAAGCGAAGCTTCTACTCGGTCTTTTCAACGATGGTTATCGGGTAGAGGAGTTGGGGGCTAACAAGCTAGTTTTGGATTGGAAATCTCGGCGCTTGCTTTCTGCCTCGCTTTGGACTTCTTCTTCCTCCGACTCCCATTAA 1509 0.5924 MEIDMDYHTDAIHSLHFSGYATITDTTPSSDDDYGCNWNHWSPLVNWDAFTGPHDDFHHLIDSIVSDGATAEYPSPDDHAASNSPSPSITEEDDAEEETAAADDSKGLRLVHLLMAAAEALTGATKSRDLARVILVRLKDLVSHAAHGSNMERLAAYFTDALQGLLEGAGGAHNNSKHHYYITCGSQHPRDDHHQNDTLAAFQMLQDMSPYVKFGHFTANQAILEAVAHERRVHIVDYDIMEGVQWASLMQALASNKTGPPGPHLRITALSRTGTGRRSVATVQETGRRLTAFAASLGQPFTFHQCRLDPDETFKPSSLKLVRGEALVFNCMLNLPHLSYRAPDSIASFLSGARELKPRLVSLVEEEVGSSVGGFVGRFMDLLHHYSAVFDSLEAGFPMQGRARALVERVFLGPRIVGSLARIYRTGEELQERGSWGEWLGASGFRGVPMSFANHCQAKLLLGLFNDGYRVEELGANKLVLDWKSRRLLSASLWTSSSSDSH* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00830 502 Pfam GRAS domain family 110 495 IPR005202 -
Phac9g00830 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 94 490 IPR005202 -
Phac9g00830 502 ProSiteProfiles GRAS family profile. 101 495 IPR005202 -
Phac9g00830 502 MobiDBLite consensus disorder prediction 68 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00830 Phac-Chr9 6164530 6166445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00830 78 500 GRAS Transcription Factor Family AT5G41920 35.566 3.77e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac9g00830 GRAS 1.1e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00830 - - gmx:100787926 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00830 9 6164530 6166445 Phac9g00830 9 6164530 6166445 ECH