Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00815 ATGAAAAGCGCAGAGGTACCGTCCTTCAACATAGCAATGGAGAATTTGCAAAGTGCTCTAAAAGATTGTGGCTTATCAGTTTCCACCGTCCCAGAAAAGGGTCGTTCTCTCTTCGCTACAAGGGATTTCTATCCAGGGGATGTGATCATAGGCCAAGAGCCTTACGTTTGTGTTCCAAACAACTCCTCACTTTCCACCCCCAAAAGGTGTGATGGATGTTTGACTACATCTAATGTCCTTAGAAGGTGCTCACGTTGCCACGTTGCATACTATTGCAGAACCGCATGTCAGAGGTCAGAGTGGAAGCTGCATCGTCTTGAGTGTGAGGTCCTCTCAAGGCTTGACAAGGAGAAGAGAAAATCTGTCACACCATCCATACGGCTGATGGTGAGACTTTATCTGCGGAGGAAGTTGCAAGATGATAAGGTCATCTCAAGTACTGCTATGGACAACTACAACTTAGTGGAGGCATTAGTGGCTCACATGTCTGATATCACAGAAGAGCAGCTGGTGCTTTACGCACAGATGGCAAATCTTGTATATTACATATTACAATGGCCGGAAATCAATATAAAAGAGATTGCAGAAAATTTTTCTAAGTTTGCATGTAATGCTCATACTATTTGTGACAGTGAGTTAAGACCTGTGGGAACAGGATTGTATCCCGTAATTTCCATTATCAATCATAGTTGTTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGGTCAGCATTGGTACGTGCTGTTGAACATATACCCATAGGTACTGAGGTACTGATAAGTTATATAGAGACTGCTGGAAGCACAATGACTCGACAGAAGGCTCTCAAAGAGCAGTACCTATTCACTTGTACATGTCCCCGCTGTTCTAAATTGGGTCAGAATGATGATATACAAGAAAGTGCAATTTTAGAAGGATATAGATGCAAAAGTGATAAATGTGGCGGTTTCTTGCTTCGAACAACTGATGGGAAAGGATTTCAATGCCAAGGTTGTCAACTAGTTATGGGCAAGGAGGAGATAAAGGAAACTATAACTGAAATTGAATTGCTATCTGAAGAAGCTGCTTCTAAGTCTTCTTTCTCTTGCGGTTTTCAAGAAGTTATTTCCATATATAAAAAGATTGAGAAACTGCAAACAGAACTATATCATCCTTTCTCAGTTAGTTTGATGCAAACTCGTGAGAAGATTTTGAAGTCATTAATGGAGCTGGAACACTGGACAGAAGCTTTAGCATATTGCAAATTGACCATTCCATTCTATGAAAAAGTGTATCCATCTATTCACCCTCTGCTTGGCTTGCAGTATTATACTTGTGGAAAACTAGAATGGTATTTGGGAGAGATAGAGGAAGGTGTTAAATCACTGACGAAGGCGGTGGATATACTACGGATTACTCATGGCACAAATACACCTTTCATGAAAGACCTCTTGATGAAGTTGGAAGAAGCCCGTGCTGAAGCCTCTTACAAATTCTCCTCCGTAGACAGCTAG 1494 0.4137 MKSAEVPSFNIAMENLQSALKDCGLSVSTVPEKGRSLFATRDFYPGDVIIGQEPYVCVPNNSSLSTPKRCDGCLTTSNVLRRCSRCHVAYYCRTACQRSEWKLHRLECEVLSRLDKEKRKSVTPSIRLMVRLYLRRKLQDDKVISSTAMDNYNLVEALVAHMSDITEEQLVLYAQMANLVYYILQWPEINIKEIAENFSKFACNAHTICDSELRPVGTGLYPVISIINHSCLPNSVLVFEGRSALVRAVEHIPIGTEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCSKLGQNDDIQESAILEGYRCKSDKCGGFLLRTTDGKGFQCQGCQLVMGKEEIKETITEIELLSEEAASKSSFSCGFQEVISIYKKIEKLQTELYHPFSVSLMQTREKILKSLMELEHWTEALAYCKLTIPFYEKVYPSIHPLLGLQYYTCGKLEWYLGEIEEGVKSLTKAVDILRITHGTNTPFMKDLLMKLEEARAEASYKFSSVDS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00815 497 Gene3D SET domain 36 289 IPR046341 -
Phac9g00815 497 Gene3D - 121 205 - -
Phac9g00815 497 Pfam SET domain 34 262 IPR001214 GO:0005515
Phac9g00815 497 SMART set_7 23 269 IPR001214 GO:0005515
Phac9g00815 497 SUPERFAMILY SET domain 20 262 IPR046341 -
Phac9g00815 497 Pfam MYND finger 70 108 IPR002893 -
Phac9g00815 497 Gene3D - 69 120 - -
Phac9g00815 497 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 26 483 - -
Phac9g00815 497 Gene3D Tetratricopeptide repeat domain 417 493 IPR011990 GO:0005515
Phac9g00815 497 ProSitePatterns Zinc finger MYND-type signature. 70 108 IPR002893 -
Phac9g00815 497 ProSiteProfiles Zinc finger MYND-type profile. 70 108 IPR002893 -
Phac9g00815 497 ProSiteProfiles SET domain profile. 23 263 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00815 Phac-Chr9 6040357 6047073 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac9g00815 SET 6.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00815 K11426 - gmx:100789518 811.601