Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00786 ATGCCTCGGCAACCGCCACCCCCACCGCCGCAGCAGCCCGGGGCTTTGGAAGCGGCGGTATGGCAAGCCTGCGCTGGACCGTCTGTGGAAATCCCGAAGCCAAATACTATGGTTTACTACTTCCCTCAGGGACACTTTGATCAAGCCTCTTCGCCTCCGCGAAACGTCTCCTCTTCCGTTCTGGCCAGACCCTTCGTTACCTGCAACGTCGTCGCTGTTCAATTTCTTGCCGATCCTCTTACCGACGAGGTTTTCGCAAAGATGGTTCTCCAACCTGTTGCTAATGTCTTCGCTGCTGCTGCTGCTCCTCCCCTTCATAATCATGCTGCTGCTCCCCCGCAAAAAGATGACAAAGAGGTTGTTTCGTTCGCCAAGATTCTCACGCCGTCTGATGCCAACAACGGCGGGGGCTTCTCCGTGCCCAGGTTTTGCGCGGACTCCATCTTCCCGCCGCTGGACTACGACGAGGACCCGCCCGTGCAGAACCTCTCCGTCACTGACGTGCACGGCTTCACCTGGGAGTTCCGCCACATTTTCCGTGGGACGCCGCGCCGCCACCTGCTTACCACCGGCTGGAGCACGTTCGTCAACAACAAGAAGCTTGTCGCCGGGGACTCCGTCTTGTTCATGAAGAGCGCCGACAAGCGTTTGTTAGTCGGAATTCGCCGCGCCACGCGCTTTGCTCCGGGAAGGGGCAGCTGCGTAAAACTCAGGTTAATTGAGGAGGAGGAGGAGGAGGAGGAGGAAAAAGAAGAGGTGAGAGGGGTTTTCTCGAGGGACGGGAAGGGGAAGCTGTCTGCTAAGGAGGTTGTGGAGGCGGCGGAGTTGGCGGTGCGGAACATGCAGTTTGAGGTTGTTTATTACCCGAAGGCTGGTTGGTCGGAGTTCGTAGTGAAGACTGAAGTGGTGGATGCAGCGATGAGGATTGCATGGAGAGAAGGAATGAGAGTGAAGATGTCTGTGGAGACCGATGATTCCTCCAGGACGACGTGGTTTCAGGGTACGGTCTCTGCTGTCTCATATCAGGAGAATGGCCAATGGTGCTCTTCTCCTTGGCGCATGCTTCAGGTTACATGGGATGAACCTGAAGGGTTGCAGAATGCAAAGTGGGTTAGCCCTTGGCAGGTAGAACTTGTTTCCACCACACCTGCTCTTCATTCAGCATTCCCCTCACCAAAAAGGCTTAGAACTGCTGATGGTTCTTGGGTGTATACTAATGGAGAGGGAGATCTCTTTTCTGTGACCGGATTCACTAATCCAGCAATGGGACACGTGAATCAAGCATTGTGGAGTTATAATACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATGTCTTTTCTGCATCAAGTTTTTCCAGTTATCCAAGGGACATGTCTCATCCGGGTATGGGTAATTCCTTTAGGAACAACACATTTTCAAGGCTGAATAATTTGTCCACAGAACCACATGTTGGCGGCAGCTCTCAATCTGATGAACCATCCCCTGATAGCCGTAGTAGTTTACATTCCTGTGTCATAGACACTGTTGGGAATCACAAAAGCAACTCAATAAAACCGGTGTCTGATTCATTTCAGCTATTTGGTGCAGTCATTCGGAAAGAACAACCTGTTCAAAGTAGTTTGACAGGCACTGGTTGCGCTAGCACAGGAGATAAAAAAGCCTTGGAATATAAGGGTTCTTACTTGTGA 1692 0.5242 MPRQPPPPPPQQPGALEAAVWQACAGPSVEIPKPNTMVYYFPQGHFDQASSPPRNVSSSVLARPFVTCNVVAVQFLADPLTDEVFAKMVLQPVANVFAAAAAPPLHNHAAAPPQKDDKEVVSFAKILTPSDANNGGGFSVPRFCADSIFPPLDYDEDPPVQNLSVTDVHGFTWEFRHIFRGTPRRHLLTTGWSTFVNNKKLVAGDSVLFMKSADKRLLVGIRRATRFAPGRGSCVKLRLIEEEEEEEEEKEEVRGVFSRDGKGKLSAKEVVEAAELAVRNMQFEVVYYPKAGWSEFVVKTEVVDAAMRIAWREGMRVKMSVETDDSSRTTWFQGTVSAVSYQENGQWCSSPWRMLQVTWDEPEGLQNAKWVSPWQVELVSTTPALHSAFPSPKRLRTADGSWVYTNGEGDLFSVTGFTNPAMGHVNQALWSYNTFPAGMQGARHDVFSASSFSSYPRDMSHPGMGNSFRNNTFSRLNNLSTEPHVGGSSQSDEPSPDSRSSLHSCVIDTVGNHKSNSIKPVSDSFQLFGAVIRKEQPVQSSLTGTGCASTGDKKALEYKGSYL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00786 563 Gene3D - 120 225 IPR015300 -
Phac9g00786 563 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 540 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac9g00786 563 SUPERFAMILY DNA-binding pseudobarrel domain 114 232 IPR015300 -
Phac9g00786 563 MobiDBLite consensus disorder prediction 461 503 - -
Phac9g00786 563 SMART B3_2 123 225 IPR003340 GO:0003677
Phac9g00786 563 MobiDBLite consensus disorder prediction 464 503 - -
Phac9g00786 563 Pfam B3 DNA binding domain 123 224 IPR003340 GO:0003677
Phac9g00786 563 FunFam Auxin response factor 121 225 - -
Phac9g00786 563 Gene3D - 312 384 - -
Phac9g00786 563 ProSiteProfiles B3 DNA-binding domain profile. 123 225 IPR003340 GO:0003677
Phac9g00786 563 Pfam Auxin response factor 273 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac9g00786 563 CDD B3_DNA 122 223 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00786 Phac-Chr9 5819557 5823931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00786 16 555 B3 DNA Binding Superfamily AT1G77850 45.109 1.23e-146 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac9g00786 B3 8.8e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00786 - - gmx:102662128 704.131