Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00777 ATGAAAATGGACATATACGAGCCATTTCAGCAAGTTGGCATGTGGGGTGACGGCTTTAAAGTTGATGGTGGCCTGAATTCAATTGCTTCCCCAATATTAATGGTTGACACTAATGTCGAGAGCAAGTCTGAATATATTCCTCAAGAATCAAGACAGCCTTCTGGAGCCGATCAAGAGACCACTGATAAAGATGTTAATAAGATGAGAAGACGTCTAGCTCAGAATAGAGAGGCTGCTCGGAAAAGTCGGCTAAGGAAAAAGGCGTATGTTAAACAGTTAGAATCAAGCCGCATGAAGCTCATGCAGTTAGAGCTTGAAATTGGGAAAGCAAGAAAGCAGGGTCTGTACATGGGCACTGCATTAGATGCCAGCTATATAGGATCAACATCAGAAACAATAAATCCAGTTATTGTTGCTTTTGAAATTGAATATGGACAATGGGTTGAAGAGCAACACAGGCGGAATGAAGAGCTTAGACATGCATTTCAAACTCAAGCACCTGATGTTCAGCTGAATGTAGTGGTTCAGAGTGTCTTGAACCATTACTCAAATCTCGTCAGAATGAAAGCAGATGCTGCAAAGGCTGATGTTCTCTATTTACTCTCTGGTGTGTGGAAAGCATCAGTGGAGCGCATCTTCCTTTGGATTGGAGGCTCCCGTCCATCACAACTTCTAAACATCATCGTACCACAACTTGAGCCTTTGACTGATCAACAAATTGTTGGTATTAACAACCTCCGCCTATCATCTCAGCAAGCTGAAGATGCTCTTTCACAGGGATTGGAAAAACTTCAGCAGAGTTTGGTCCATGACATGGCAGTTGATCCATTCGGTGTAGGAAACTTCGAACTTCAGATGGCTGCTATGGAAAAATTTGATGCACTAGAAGGTTTTGTAATCCAGGCAGATCACCTTAGACTACAAACTCTGCTTCACATGTCACGCATCCTCTCAACTCACCAAGCTGCTCGTGGCTTGCTGGCTCTTGGGGAATACTTTCACCGTCTTCGCACTCTTTGCTCTCTTTGGGCTTCTCGTCCATGTGAACTTCCCTAG 1056 0.4375 MKMDIYEPFQQVGMWGDGFKVDGGLNSIASPILMVDTNVESKSEYIPQESRQPSGADQETTDKDVNKMRRRLAQNREAARKSRLRKKAYVKQLESSRMKLMQLELEIGKARKQGLYMGTALDASYIGSTSETINPVIVAFEIEYGQWVEEQHRRNEELRHAFQTQAPDVQLNVVVQSVLNHYSNLVRMKADAAKADVLYLLSGVWKASVERIFLWIGGSRPSQLLNIIVPQLEPLTDQQIVGINNLRLSSQQAEDALSQGLEKLQQSLVHDMAVDPFGVGNFELQMAAMEKFDALEGFVIQADHLRLQTLLHMSRILSTHQAARGLLALGEYFHRLRTLCSLWASRPCELP* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00777 351 ProSiteProfiles DOG1 domain profile. 137 346 IPR025422 GO:0006351|GO:0043565
Phac9g00777 351 PANTHER TRANSCRIPTION FACTOR TGA9 3 349 - -
Phac9g00777 351 Coils Coil 86 113 - -
Phac9g00777 351 Gene3D - 66 115 - -
Phac9g00777 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 65 100 IPR004827 GO:0003700|GO:0006355
Phac9g00777 351 MobiDBLite consensus disorder prediction 43 66 - -
Phac9g00777 351 Pfam bZIP transcription factor 67 96 IPR004827 GO:0003700|GO:0006355
Phac9g00777 351 SUPERFAMILY Leucine zipper domain 67 100 IPR046347 GO:0003700|GO:0006355
Phac9g00777 351 FunFam BZIP family transcription factor 66 115 - -
Phac9g00777 351 Pfam Seed dormancy control 156 229 IPR025422 GO:0006351|GO:0043565
Phac9g00777 351 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 70 85 IPR004827 GO:0003700|GO:0006355
Phac9g00777 351 SMART brlzneu 62 123 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00777 Phac-Chr9 5764060 5768032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00777 3 349 Calmodulin-binding Proteins AT1G77920 53.867 3.85e-127 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac9g00777 DOG1 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00777 K14431 - gmx:100794268 602.438