Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00776 ATGAAAATGGACATATACGAGCCATTTCAGCAAGTTGGCATGTGGGGTGACGGCTTTAAAGTTGATGGTGGCCTGAATTCAATTGCTTCCCCAATATTAATGGTTGACACTAATGTCGAGAGCAAGTCTGAATATATTCCTCAAGAATCAAGACAGCCTTCTGGAGCCGATCAAGAGACCACTGATAAAGATGTTAATAAGATGAGAAGACGTCTAGCTCAGAATAGAGAGGCTGCTCGGAAAAGTCGGCTAAGGAAAAAGGCGTATGTTAAACAGTTAGAATCAAGCCGCATGAAGCTCATGCAGTTAGAGCTTGAAATTGGGAAAGCAAGAAAGCAGGGTCTGTACATGGGCACTGCATTAGATGCCAGCTATATAGGATCAACATCAGAAACAATAAATCCAGTTATTGTTGCTTTTGAAATTGAATATGGACAATGGGTTGAAGAGCAACACAGGCGGAATGAAGAGCTTAGACATGCATTTCAAACTCAAGCACCTGATGTTCAGCTGAATGTAGTGGTTCAGAGTGTCTTGAACCATTACTCAAATCTCGTCAGAATGAAAGCAGATGCTGCAAAGGCTGATGTTCTCTATTTACTCTCTGGTGTGTGGAAAGCATCAGTGGAGCGCATCTTCCTTTGGATTGGAGGCTCCCGTCCATCACAACTTCTAAACATCATCGTACCACAACTTGAGCCTTTGACTGATCAACAAATTGTTGGTATTAACAACCTCCGCCTATCATCTCAGCAAGCTGAAGATGCTCTTTCACAGGGATTGGAAAAACTTCAGCAGAGTTTGGTCCATGACATGGCAGTTGATCCATTCGGTGTAGGAAACTTCGAACTTCAGATGGCTGCTATGGAAAAATTTGATGCACTAGAAGGTTTTGTAATCCAGATCACCTTAGACTACAAACTCTGCTTCACATGTCACGCATCCTCTCAACTCACCAAGCTGCTCGTGGCTTGCTGGCTCTTGGGGAATACTTTCACCGTCTTCGCACTCTTTGCTCTCTTTGGGCTTCTCGTCCATGTGAACTTCCCTAGTTTCCCTAACTTAGGCTCCTTGGGACTCTACAAATCATCTAAGATTGCTCCATGA 1107 0.4354 MKMDIYEPFQQVGMWGDGFKVDGGLNSIASPILMVDTNVESKSEYIPQESRQPSGADQETTDKDVNKMRRRLAQNREAARKSRLRKKAYVKQLESSRMKLMQLELEIGKARKQGLYMGTALDASYIGSTSETINPVIVAFEIEYGQWVEEQHRRNEELRHAFQTQAPDVQLNVVVQSVLNHYSNLVRMKADAAKADVLYLLSGVWKASVERIFLWIGGSRPSQLLNIIVPQLEPLTDQQIVGINNLRLSSQQAEDALSQGLEKLQQSLVHDMAVDPFGVGNFELQMAAMEKFDALEGFVIQITLDYKLCFTCHASSQLTKLLVACWLLGNTFTVFALFALFGLLVHVNFPSFPNLGSLGLYKSSKIAP* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00776 368 CDD bZIP_HBP1b-like 67 119 - -
Phac9g00776 368 Pfam Seed dormancy control 156 229 IPR025422 GO:0006351|GO:0043565
Phac9g00776 368 ProSiteProfiles DOG1 domain profile. 137 347 IPR025422 GO:0006351|GO:0043565
Phac9g00776 368 PANTHER TRANSCRIPTION FACTOR TGA9 3 301 - -
Phac9g00776 368 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 70 85 IPR004827 GO:0003700|GO:0006355
Phac9g00776 368 Gene3D - 66 115 - -
Phac9g00776 368 Pfam bZIP transcription factor 67 96 IPR004827 GO:0003700|GO:0006355
Phac9g00776 368 Coils Coil 86 113 - -
Phac9g00776 368 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 65 100 IPR004827 GO:0003700|GO:0006355
Phac9g00776 368 MobiDBLite consensus disorder prediction 43 66 - -
Phac9g00776 368 SUPERFAMILY Leucine zipper domain 67 100 IPR046347 GO:0003700|GO:0006355
Phac9g00776 368 FunFam BZIP family transcription factor 66 115 - -
Phac9g00776 368 SMART brlzneu 62 123 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00776 Phac-Chr9 5764060 5768032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00776 2 301 Calmodulin-binding Proteins AT5G10030 49.835 1.88e-99 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac9g00776 DOG1 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00776 K14431 - gmx:100794268 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00776 9 5764060 5768032 Phac9g00776 9 5764060 5768032 ECH
Phac8g02156 8 29172735 29177195 Phac9g00776 9 5764060 5768032 PCT