Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00736 ATGGCAGCCATGATGGGTTTTTACAGCAGCACAGAGTTTCAACTTCCCTCAGATCCGTTCAGGGGAGAACTAATGGAAGTTCTTGAACCTTTTATGAAAAGTCCTTCCTCAACCCCCTCTTTCTCTTCCTCACCTTCAAACTCCTCTTTCCCTTCTACTTCTTACTCTCCTTCTCCCGTCTACTTCCCCTCCTCACCCTCCTTGCCTAATATTTATGCAAACAACTGCTCCGCGTCGATGACCCATGTATTTTCCGACGCCTTATCCCTATCCAACACTCAAAATATCATAGGCTTCGCTCAAGGCCAACCAACATCTCTTCTCGGCCTCAACCACCTAACCCCCTCTCAGATCTCTCAGATCCAGGCTCAAATCCAGATTCAGAGCCAGCATCAGCAGAATCTCAACACTCTGAACTTCCTCGGGCCCAAGCCCATCCCCATGAAGCACGCGGGCATGCCTCTCAAGCCCACGAAGCTTTACCGAGGGGTGCGTCAGAGGCACTGGGGGAAGTGGGTGGCTGAGATCAGACTTCCCAAGAATCGGACCAGGCTCTGGCTGGGAACCTTCGACACCGCCGAGGAAGCCGCTCTGGCGTACGACAAGGCTGCGTACAAACTCCGAGGTGATTTCGCCAGGCTTAACTTCCCCAACCTCCGTCACCAGGGTTCCTCGGTGGGCGGAGGCTTCGGGGAGTACAAGCCGCTCCATTCCTCTGTTGACGCTAAGCTTCAGGCCATTTGCGAAGGCCTGGCTGAGATGCAGAAACAGGGAAAGACCGAAAAACCTCAGGGTTCGTCCAGGAGGTCGCGAGCCAAAGTCGCTCCTCCGCCAGAGAAGGCTGATTCCGATAAGGGTTCGGACAACACCACCACCAACAACTCTTGCAAAGTGGAAGCATCTTCGTCTCCCGTCACGACGGAAAGCGAGGGGTCTGAAGGTTCTTCGCCTCTCTCGGATCTGACATTTGTTGACGTGAGCGAGCCTCAGTGGGAAGGTGATTCGGATAATTTTAACCTCCACAAGTACCCCTCTTATGAGATCGACTGGGATTCTCTGTGA 1062 0.5348 MAAMMGFYSSTEFQLPSDPFRGELMEVLEPFMKSPSSTPSFSSSPSNSSFPSTSYSPSPVYFPSSPSLPNIYANNCSASMTHVFSDALSLSNTQNIIGFAQGQPTSLLGLNHLTPSQISQIQAQIQIQSQHQQNLNTLNFLGPKPIPMKHAGMPLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSSVGGGFGEYKPLHSSVDAKLQAICEGLAEMQKQGKTEKPQGSSRRSRAKVAPPPEKADSDKGSDNTTTNNSCKVEASSSPVTTESEGSEGSSPLSDLTFVDVSEPQWEGDSDNFNLHKYPSYEIDWDSL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00736 353 Gene3D AP2/ERF domain 160 218 IPR036955 GO:0003700|GO:0006355
Phac9g00736 353 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 8 353 - -
Phac9g00736 353 SMART rav1_2 160 223 IPR001471 GO:0003700|GO:0006355
Phac9g00736 353 MobiDBLite consensus disorder prediction 255 337 - -
Phac9g00736 353 FunFam Ethylene-responsive transcription factor 2 159 218 - -
Phac9g00736 353 CDD AP2 159 219 IPR001471 GO:0003700|GO:0006355
Phac9g00736 353 Pfam AP2 domain 161 209 IPR001471 GO:0003700|GO:0006355
Phac9g00736 353 SUPERFAMILY DNA-binding domain 160 218 IPR016177 GO:0003677
Phac9g00736 353 PRINTS Ethylene responsive element binding protein signature 161 172 IPR001471 GO:0003700|GO:0006355
Phac9g00736 353 PRINTS Ethylene responsive element binding protein signature 183 199 IPR001471 GO:0003700|GO:0006355
Phac9g00736 353 MobiDBLite consensus disorder prediction 262 286 - -
Phac9g00736 353 MobiDBLite consensus disorder prediction 287 323 - -
Phac9g00736 353 ProSiteProfiles AP2/ERF domain profile. 160 217 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00736 Phac-Chr9 5253782 5255712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00736 1 353 AP2-EREBP Transcription Factor Family AT1G78080 53.117 6.32e-101 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac9g00736 AP2 8.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00736 K09286 - gmx:100800478 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00736 9 5253782 5255712 Phac9g00736 9 5253782 5255712 ECH
Phac8g02221 8 29990030 29992131 Phac9g00736 9 5253782 5255712 PCT