Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00734 ATGGCTGTGCTTAGCGGGTTTTGGGGCCTGCCCCATAAGAATCTTGTAAAAAGGTTGGAAGGAGCTAAAGTTGGTGCTTGGATTGATTCAATGAGAGCCTCTTCCCCAACTCGTGCCAAATCAGAAAGCCAAGAAAAAAGATCTTGGATTCTTTATCACCCTTCAGCTCTGAATACCTTTGAGCAAATAACATATAATTCCAAAGGCAAACAGATTGTAGTTTTTCTTGACTACGATGGAACTCTCTCCCCTATAGTTACAGATCCGGATAAAGCTTTCATGAGCAGAAAGATGAGAGCGACGCTTAAGGGAATCGCAAGACATTTTCCCACAGCAATCGTGACCGGGAGGTGCAGGGACAAGGTCTATAACTTTGTAAAACTGGCAGAACTTTACTATGCCGGGAGCCATGGCATGGACATCAAAGGGCCAACAAAAAGCCGAAGTGGAAAGCAAGGTAACAATAAAGGTGTACTGTTTCAACCCGCGAGTCAATTCCTGCCCATGATCGATGAGGTGTACAAGATCTTGTTAGAAAGAACAAAGTCTGTCCCAGGGGCTAAGGTGGAGAACAATAAGTTTTGCTTGTCCGTTCACTTTCGTTGTGTTGACGAAAAGAGTTGGGCATCATTGGCGGACAAAGTTAGATTGGTGCTCAATGAGTACCCACAACTTAAGCTAACCCAAGGGAGAAAAGTGCTAGAGATTCGTCCAACCATCAAATGGGACAAGGGCAAGGCTCTTGAATTTTTGTTAGAATCATTAGGATACGAGAATTCGAATGATGTATTTCCAATCTATATTGGTGATGATCGAACTGATGAGGATGCTTTTAAGGTTTTGCGCAGTAGGGGTCAAGGAATTGGGATACTTGTTTCTAGAGTTGCAAAAGAAACAGATGCTTCCTATACCTTGCAAGATCCATCAGAGGTTGAGCAATTCTTGGGGCGATTGGTGGAATGGAAAAGATCGAGTAGTGTGAAGTGTATAGAGTTGTAG 999 0.4334 MAVLSGFWGLPHKNLVKRLEGAKVGAWIDSMRASSPTRAKSESQEKRSWILYHPSALNTFEQITYNSKGKQIVVFLDYDGTLSPIVTDPDKAFMSRKMRATLKGIARHFPTAIVTGRCRDKVYNFVKLAELYYAGSHGMDIKGPTKSRSGKQGNNKGVLFQPASQFLPMIDEVYKILLERTKSVPGAKVENNKFCLSVHFRCVDEKSWASLADKVRLVLNEYPQLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLRSRGQGIGILVSRVAKETDASYTLQDPSEVEQFLGRLVEWKRSSSVKCIEL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00734 332 Pfam Trehalose-phosphatase 75 309 IPR003337 GO:0003824|GO:0005992
Phac9g00734 332 NCBIfam trehalose-phosphatase 70 319 IPR003337 GO:0003824|GO:0005992
Phac9g00734 332 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 19 327 IPR044651 GO:0004805|GO:0005992
Phac9g00734 332 FunFam Trehalose 6-phosphate phosphatase 163 239 - -
Phac9g00734 332 CDD HAD_TPP 73 311 - -
Phac9g00734 332 Gene3D - 72 169 IPR023214 -
Phac9g00734 332 Gene3D - 177 329 IPR023214 -
Phac9g00734 332 NCBIfam HAD-IIB family hydrolase 74 283 IPR006379 -
Phac9g00734 332 FunFam Trehalose 6-phosphate phosphatase 72 158 - -
Phac9g00734 332 SUPERFAMILY HAD-like 73 321 IPR036412 -
Phac9g00734 332 FunFam Trehalose 6-phosphate phosphatase 169 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00734 Phac-Chr9 5200340 5203374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00734 10 315 Trehalose Biosynthesis Gene Families AT1G70290 25.298 4.62e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00734 K01087 - gmx:100788641 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00734 9 5200340 5203374 Phac9g00734 9 5200340 5203374 ECH
Phac8g02223 8 30089265 30091962 Phac9g00734 9 5200340 5203374 PCT