Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00693 ATGAGTGAGACAGCAAGTCTTCATGCACAAACAAGGACGCCCATTTCTTCTCTGGAAGCCATGGCCCATCACCACCCGCATTATCGATCACCCTTCGGAGACACAACCTTCACCAAACTGTTCGTGGGAGGACTGGCCTGGGAGACTCCCACCGAAGAAATGCGCAAATATTTCCAGCAGTTCGGCGACATTCTTGAAGCTGTCATAATCACTGACAAGAACACCGGAAAATCCAAAGGCTACGGATTCGTAACATTCTGCGACCAAGAATCAGCAAGGAGAGCATGTGCTGATCCAAATCCAATAATAGATGGCAGAAGAGCAAATTGTAATATTGCTTCTCTGGGAAGGACTCGACCTTCACCACCTCGAGGGAGGAATATAGTTCAAGGTGGAGGAGGAACAGCACAGAGTGTTCCGGGAGCGGGACCACCGCCGTCGCTGCCGCCAGCACCTGCTGTTCTGTATCCACCATATGGCTATACAACCTACACCCCTGATTATGGATACCACCACCAAGCCACATTGTACAACCCACAGATTCAGCAACCACAATACTATCAACAAGTCTATGGAGCATCATCTTCCACCATGAGCACCCCATATTACTATGGTTACTCTGTGCAAGCACCAAGAAGCACATTTTCCTCACCCCAGGCAAATCGCCTATCACCTGGACCATCTTATCTGTACTATCCTACACCCGTGGAAGTCTCATTCTCTGGATATCGCCCACTCCAACAATCACCAATGAGCCAAAACTTTCCTTCTCCAAGTGATTCACAGAGTCAGCAGCGTATCTCCTCTGAAACAGCAGCCACTTCAGAAAGTTCAAATACCCAAGGGAAGAACTAA 855 0.4865 MSETASLHAQTRTPISSLEAMAHHHPHYRSPFGDTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASLGRTRPSPPRGRNIVQGGGGTAQSVPGAGPPPSLPPAPAVLYPPYGYTTYTPDYGYHHQATLYNPQIQQPQYYQQVYGASSSTMSTPYYYGYSVQAPRSTFSSPQANRLSPGPSYLYYPTPVEVSFSGYRPLQQSPMSQNFPSPSDSQSQQRISSETAATSESSNTQGKN* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00693 284 MobiDBLite consensus disorder prediction 242 284 - -
Phac9g00693 284 MobiDBLite consensus disorder prediction 115 144 - -
Phac9g00693 284 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 97 IPR000504 GO:0003723
Phac9g00693 284 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 115 IPR000504 GO:0003723
Phac9g00693 284 SMART rrm1_1 39 111 IPR000504 GO:0003723
Phac9g00693 284 CDD RRM_RBM24_RBM38_like 38 113 - -
Phac9g00693 284 Gene3D - 5 135 IPR012677 -
Phac9g00693 284 PANTHER BOULE-RELATED 16 270 - -
Phac9g00693 284 FunFam RNA-binding protein 24-B isoform X1 25 134 - -
Phac9g00693 284 SUPERFAMILY RNA-binding domain, RBD 21 137 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00693 Phac-Chr9 4715984 4721208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00693 34 114 C2H2 Transcription Factor Family AT2G19380 38.272 5.15e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00693 K25006 - gmx:100811977 481.87