Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00662 ATGGCACTAGAAGCTGTGGTATTTCCGCCGTACGCTTGCAAGGATTATTTTTACTCCTTAGTAGGAGCAGCACCCAACTTCGGTTTTCAAGCGGCAGAAGAAGAGAAACTCCTCCTAGGAATCATCAACACCAACATAGAACACAATCTATACGCAAACTTGGATTCTTCTTCTACCAAGATCTTGCAAAATGTGAAGGAACAATGGGATTCTCACTCCTCCCCCGAAGCCTGCACCATTGATGAATCTATGATCCCACCTCCTTCTTCGTCGGCGGAAGCCACCGCGACAACGACGAGTCGGCGCAAACGGCGTCGTACGAAGAGCGAGAAGAACAAAGAGGAAATCGAAAACCAGAGGACGACCCACATTGCAGTTGAACGGAACCGCAGAAAGCAGATGAACGAGTACTTAGCCGTACTCCGATCCTTGATGCCCTCTTCTTACGTTCAGAGGGGTGACCAAGCGTCTATCATTGGAGGGGCAATTAACTTTGTGAAGGAGTTGGAGCAGGTTTTGCAGTCAATGGAGGGTGAAAAAAGAAGGAAGCAGGGTGAAGAGAATGTTGGAGCCTTTGCTGAGTTCTTCACGTTTCCTCAGTACACGACGCGTGGCACGCAGAAGCAGGAACAGAAACAATGGGCCGTAGCAGACATTGAAGTCACCATGGTGGATAGTCATGCCAATCTAAAGATCCTCTCAAAGAAACAACCCTCCCATCTTATGAAGATCGTTCTCGGCCTTCAAAGTCTCAGACTCACCATTCTCCACCTCAATGTTACCACTCTCCACCACATGGTCCTCTACTCAATTAGCGTTAAGGTTCTTACTGAATCAACACTTTGTTCTTTCCTTTTCCGTCTTCCGTTTCTTATTCTCTCTGTTTGGATTGATTGGAGCAGGTAG 906 0.4746 MALEAVVFPPYACKDYFYSLVGAAPNFGFQAAEEEKLLLGIINTNIEHNLYANLDSSSTKILQNVKEQWDSHSSPEACTIDESMIPPPSSSAEATATTTSRRKRRRTKSEKNKEEIENQRTTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQASIIGGAINFVKELEQVLQSMEGEKRRKQGEENVGAFAEFFTFPQYTTRGTQKQEQKQWAVADIEVTMVDSHANLKILSKKQPSHLMKIVLGLQSLRLTILHLNVTTLHHMVLYSISVKVLTESTLCSFLFRLPFLILSVWIDWSR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00662 301 CDD bHLH_AtFAMA_like 122 188 - -
Phac9g00662 301 SMART finulus 124 175 IPR011598 GO:0046983
Phac9g00662 301 Gene3D - 96 186 IPR036638 GO:0046983
Phac9g00662 301 Coils Coil 166 186 - -
Phac9g00662 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 169 IPR011598 GO:0046983
Phac9g00662 301 MobiDBLite consensus disorder prediction 73 118 - -
Phac9g00662 301 MobiDBLite consensus disorder prediction 73 97 - -
Phac9g00662 301 PANTHER MAX DIMERIZATION, MAD 69 281 - -
Phac9g00662 301 Pfam Helix-loop-helix DNA-binding domain 119 170 IPR011598 GO:0046983
Phac9g00662 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 118 185 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00662 Phac-Chr9 4472576 4474348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00662 1 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 46.230 1.69e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g00662 HLH 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00662 - - gmx:100789380 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00662 9 4472576 4474348 Phac9g00662 9 4472576 4474348 ECH
Phac8g02302 8 31697813 31700583 Phac9g00662 9 4472576 4474348 PCT