Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00661 ATGACCACTCTCGCACTCAAACCCCACACCACTCTCCACCATGACCTTTTTCTTTTCTATTTTTATTTTCTTCTCCTCACACACTTTCCGCCGCCGGCCGCCGCGCAGCTTCCCAACGCGCTGACGCCACCGCCGCCGGACCGGCTATCGAAGCTAAAGTTCGACAAGTCCATGGCCATCGTTCTGGTGATCCTGGTGGCGGTGTTCTTCTTACTTGGGTTCCTCTCCGTGTACACGCGCCAGTGCGCAGAGCGAAGGATGCGAGGGAGGTTCGACCTCTCCATCTCGATCGGGCGTCGGAACCGCGGTCTGGACCGCGAAATCATCGAGACCTTCCCCACCTTCGTCTACTCCACCGTGAAGAGCCTGAAGATAGGACTGGCCACGCTAGAATGCGCCGTGTGCCTGAGCGAGTTCGAGGAGGAGGAAACGCTGCGTTTGATACCCAAGTGCAGCCATGTGTTCCACCCCGAGTGCGTCGACGCGTGGCTCGCTAATCACTCCACCTGTCCCGTCTGTCGCGCCAACCTTCTCCCCAAACCCGACGACCCATCCTTTGTTTCCATCCAAATCCCGGATCCGGTTCAACCCGTTTTAAACTCCCCGGTCCAACCCGAACCCACGGTTTCTCCGAAGCCGAATGATTTGATTAATTACAACCGTTCACCGTGGTCAAGGTCAACGGGTTTCAGCATCGCCAGTTTGATTCCGCGATCTCACTCGACGGGTCACTCCCTGGTTCAACCGGGAGAGAATTGCGAGCGCTTCACTCTGCGTTTGCCCGAGGAAGTGCGGAACCAGCTGATGACTTCCACCACGCTGAGTCGCACCACGAGCTGCGGCTTGAACCTGGGTCTCACGCGCGAGAATAGTGGGAGGAGGGGTTACAGGACCAGAAGTGTTGGTAGCAGTCTTAGTACTCACGTGACCAGAGCCGTGGGTAGCACCAGCAGCAGCCCTCACGTGCGGGGACACGACAGACGTTGGTTTTTTCAGAGCCCTCCCGCAAAGGACTCCATTAAGGAAGATGTCGGCGAACGTTCCTCGGATCGCCTTTTCTCGGAGACCACAAAGGATAGTGATAATTAA 1089 0.5693 MTTLALKPHTTLHHDLFLFYFYFLLLTHFPPPAAAQLPNALTPPPPDRLSKLKFDKSMAIVLVILVAVFFLLGFLSVYTRQCAERRMRGRFDLSISIGRRNRGLDREIIETFPTFVYSTVKSLKIGLATLECAVCLSEFEEEETLRLIPKCSHVFHPECVDAWLANHSTCPVCRANLLPKPDDPSFVSIQIPDPVQPVLNSPVQPEPTVSPKPNDLINYNRSPWSRSTGFSIASLIPRSHSTGHSLVQPGENCERFTLRLPEEVRNQLMTSTTLSRTTSCGLNLGLTRENSGRRGYRTRSVGSSLSTHVTRAVGSTSSSPHVRGHDRRWFFQSPPAKDSIKEDVGERSSDRLFSETTKDSDN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00661 362 SUPERFAMILY RING/U-box 126 182 - -
Phac9g00661 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 179 IPR013083 -
Phac9g00661 362 MobiDBLite consensus disorder prediction 287 362 - -
Phac9g00661 362 CDD RING-H2_EL5-like 131 174 - -
Phac9g00661 362 MobiDBLite consensus disorder prediction 296 320 - -
Phac9g00661 362 FunFam E3 ubiquitin-protein ligase ATL6 93 180 - -
Phac9g00661 362 PANTHER RING FINGER DOMAIN-CONTAINING 43 183 - -
Phac9g00661 362 SMART ring_2 132 173 IPR001841 -
Phac9g00661 362 MobiDBLite consensus disorder prediction 339 362 - -
Phac9g00661 362 ProSiteProfiles Zinc finger RING-type profile. 132 174 IPR001841 -
Phac9g00661 362 Pfam Ring finger domain 131 174 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00661 Phac-Chr9 4431292 4433042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00661 21 295 Rapid Response to Elicitors AT3G05200 42.857 1.74e-64 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00661 K10664 - gmx:100805815 439.113