Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00620 ATGGAACCCAGCGAAACGACTTCGGATTCAGCTCCGCGAAAATTGGTCAGGCAATTGGATTTCACCCTCGTTTATGAAGATCCTCCGCACCTGAAACTGCCTCCTCCGTCGCCACCGCAGCATTCGCTTCTGCCACCCCCATCGCATTCTCTGCTGCAGTTGCAGTTAAATATGCAGTCACCGGGGCAACGCCCGTGGTTATATTCCGAGCCGCAGGGGCAACAGCCCTGGCTACATTCACCGCGACCGAAGCTAGTTTCGTGGGTTAGTCGTTTTCCGCCGGTACAGAAACTTCCCGTTAAGGTGTTGCCAGTGGTGAAGCCAGATTCTCCTAGATCACAACCTCGATTTAATGTGGAATCAAAGGACACGAATCTAAAGAAACAGAAACAATGTAACTGCAAAAATTCTAGATGCCTCAAATTGTACTGTGAGTGCTTTGCAGCTGGGATCTATTGTGATGGCTGCAACTGTGTAAATTGTCATAATAATGTGGATAATGAGGCTGCCAGACAGGAGGCAGTTGGAATAACATTGGAACGAAACCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAACAACGAAATTCCAAGGAAAGTGAAGCTCAAGTTATAGGAAAACACAATAAAGGATGTCACTGCAAGAAATCTGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTACTGAAAGAAGAGCAATTTTTCACAGAGAGTATAATCAAGTTCACATCAAACAGGGAACTAGTGCTGCCGTAACCGAAGTAGTTGGATCATCTGGCTATAGAAACCATATAACACCCAAGAGGAGAAAAATTCAGGAAATGTTTTCTGGAAAGGCAACTGTGGATCAAACTGTTAACACGACTGCCCAGTACCTACAGGCAATTGATCGTATGGCTTCACCGCCTTCATCTCTGTCAGATTCCTTTGTTTTTGACCAGGTCAACTCAAGAATTTCAGGGTCTTCAAGGTCTATATACTACGTGACTTTTCTAATCATTTTTTGA 1077 0.4429 MEPSETTSDSAPRKLVRQLDFTLVYEDPPHLKLPPPSPPQHSLLPPPSHSLLQLQLNMQSPGQRPWLYSEPQGQQPWLHSPRPKLVSWVSRFPPVQKLPVKVLPVVKPDSPRSQPRFNVESKDTNLKKQKQCNCKNSRCLKLYCECFAAGIYCDGCNCVNCHNNVDNEAARQEAVGITLERNPNAFRPKIASSPQEQRNSKESEAQVIGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSTERRAIFHREYNQVHIKQGTSAAVTEVVGSSGYRNHITPKRRKIQEMFSGKATVDQTVNTTAQYLQAIDRMASPPSSLSDSFVFDQVNSRISGSSRSIYYVTFLIIF* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00620 358 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 129 164 IPR005172 -
Phac9g00620 358 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 213 247 IPR005172 -
Phac9g00620 358 SMART CXC_2 127 167 IPR033467 -
Phac9g00620 358 SMART CXC_2 210 251 IPR033467 -
Phac9g00620 358 MobiDBLite consensus disorder prediction 27 48 - -
Phac9g00620 358 ProSiteProfiles CRC domain profile. 128 250 IPR005172 -
Phac9g00620 358 MobiDBLite consensus disorder prediction 29 45 - -
Phac9g00620 358 PANTHER TESMIN/TSO1-RELATED 24 299 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00620 Phac-Chr9 4129941 4134212 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00620 108 349 CPP Transcription Factor Family AT4G29000 58.871 4.48e-91 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Phac9g00620 TCR 1.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00620 - K21776 gmx:100811459 501.516