Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00605 ATGGAAGGTGAGAGGACAATCCCTGCTGTAGATGGGGTGACAGATGGCGTTCAGAAAATTAGAGCTCTGCACGGGAGGACTACTGGCCCTACCAGGCGCTCTACAAAAGGACAATGGACACCTGAAGAGGACGAAATTTTGCGGAAGGCTGTCCAGCGTTTTAAAGGAAAGAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCTTGCATAGGTGGCAGAAAGTCTTAAATCCTGAACTTGTCAAAGGTCCATGGTCTAAGGAGGAGGATGAAATAATTATTGATTTGGTGAATCGATATGGGCCCAAGAAGTGGTCTACTATTGCACAGAAGTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTACTATAAATAAGGAAGCATGGACGCAGGAAGAGGAGTTGGCTCTCATACGTGCGCATCAGATTTATGGGAACAAATGGGCAGAATTAGCGAAGATATTGCCTGGAAGGACAGACAATGCTATAAAAAACCATTGGAATAGTTCCGTAAAAAAGAAATTGGATTCTTACTTGGCATCAGGCTTGCTTACTCAGTTACAAAATGTCCCACTTGCTGGAAATCCGAATCAACCTATTGCTTCAGTCTCTTCGAGGTTGCAGCAGAGTGGAGAAGATAACGGTCCTAGGGGGACTGAAGGAGATGAAGTTTCACAGTGTAGCCAGGAGTCAGCTAATGCTGGTTACTTTTCATCAGCCAGAGAGATGAACAGTGTTGCTTTACTAACTGGAGAGGAATACAGGCCAAATGAAGAGCCTAGTCAAGCATCCTGTTCTGAGCCATATTACGTGTCTCTGGATGAAGTAACTGCATCCCTTCCAGACATTTCTGGCCAAGAGATTTGCACTTCTCAATTCGTTGAACAGAAATATTCACACAACCCTGGAAATTCGAATAACGGGGAAGGACAACTTGATTTAATTGACTTGACCAATATTTCCTCACTGGAGTTTGGGCAGGAATCATCACAGTTGCAAAATGATTGCATGATGAATGTTCCATTTCAGACTTCGGTGGGGTTAGGTGTCACAACAACCATGCGACCTACATCTATGGACTCTGTTAAACCCGAACACGTGTTGATGTCTGACGATGAATGTTGCAGAATCCTATTTTCAGAAGCAATAAGCGATGAATGTTTTTCTTCTGAAGATTATAATAAAGGTGTGAATATGGTTGACTTATTAGGAGGTCCCTCATTTCTTTGTCCGTCATCACTACCATTTGTCCCCTCCGTTGTTTCTTCTACTGGAGATAGGTTGATGTATACGGCAGAAAGCAATCGGTTGGTTGAGTCTGAGGATCAGCAGTTTGTCTCCAGAACGCAGGATAACACAATTTATGCCAGTGACTTGTCCAGACCTCCTTGTATCCATAGGATAGACAACACTGAAATGCATGAGCCATCAGATGTTGTCAAAGATGATTCAAAATTGGTCCCTGTAAATAATTTTGGCTGTGAATCAGATGCAAAGTCAACTTCATATCCAACGGACGAAAATTCAAATGTGCATACAGAACAGAACACAGGTGCTCTATGTTATGAACCTCCCCGCTTCCCAAGCTTGGACATTCCTTTCTTAAGCTGTGATCTTATACAATCTGGGGGCGATATGCAGCAAGAATTCAGTCCCCTTGGTATTCGCCAATTTATGATGTCTTCTATGAACTGTCTAACTCCTTTTAGATTATGGGACTCACCTTCTCGGGATGATAGCCCAGATGCTTTGTTAAAAAGTGCAGCTAAAACCTTCAAAGGTACACCATCTATATTAAAGAAACGAAACCGAGATCTCTTATCTCCACTATCGGAGAAAAGAATTGACAAGAAACTTGAGATTGAAATGACATCAACCTTGATAAAAAACTTTTCCCGATTGGATGTCATGTTTGATGACAATGAGACTCTGGGAGCAGATTTGCTTCCTCCGTCTTCAATGCCAAAAAAGGACTCTGGTACCTCTGTTGAAGATGATAAAGAGAATTGTGGACAAGCCGTTAGAGTGGAACGACTAGAGGAAAAAAGTAAGCATGCTATTTTGGACGACAAAAATTCTGAAAAAGATTCAGGTGATGGTAATTCTCAGGAAAAAATTAAGCAACCTGTTGCTGTTGATTCTGCGATCGGGAATGATGTTAGTGCTGCTGTTGAGATTGTGCAACAACCGTCTGGAGTTTTGGTTGAACATGATATGAATGACCTACTAATGTATTCACCAGATCAAGTAAATTTGAAATCAGAAAGAGTTCCCAGTTTAAGTGCTAAAACTATAAAAAATCCGTGCTCAAAGATTAATTCACCATCTGTTTGGTTAAAGGAGCATGAAAGACTTTCAGTGGCCGTTACTTGTATACATTCTGTCAGTACATCAGGCCCAGGGGAGAATTCGGTTGATCACACTGGAAACGATGGTGGTCTTGAAACATGTAGCATATTTGGTGGAACACCGTTTAGGAAAAGCATTGAATCGCCTTCAGCATGGAAATCTCCTTGGTTCATCAACACTTTTTTGTCCAGTCCCAGGATTGATACTGAAATTACAATTGAGGATTTTGGGTATTTTATGAGCCCTGGTGACAGAAGCTATGATGCAATCGGGTTGATGAAACAGATCAATGAACAAACTGCTGCTCAGTATGCCAGTGCTCATGCGATCTTAGGAAATGAAACTCCTAAGGCTTTATCTAAAGGTAAGTCCAGAAACGATGGGGATGAAGACCGGGATGATATCGATCCTAATAATCAGCATGGGGACCATTCTCAGTCGGCTTCAAGTGCCTTGGTGGAACGACGTGTGCTTGACTTTAGCGAATGTGGAACTCCGGTCAAAGGTGACAGCAGCAAATCCTCAGCTATGAGCTTCTCAAGCCCAACTTCGTATTTGTTGAAGGGCTGTAGATAA 2967 0.4206 MEGERTIPAVDGVTDGVQKIRALHGRTTGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNRYGPKKWSTIAQKLPGRIGKQCRERWHNHLNPTINKEAWTQEEELALIRAHQIYGNKWAELAKILPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQLQNVPLAGNPNQPIASVSSRLQQSGEDNGPRGTEGDEVSQCSQESANAGYFSSAREMNSVALLTGEEYRPNEEPSQASCSEPYYVSLDEVTASLPDISGQEICTSQFVEQKYSHNPGNSNNGEGQLDLIDLTNISSLEFGQESSQLQNDCMMNVPFQTSVGLGVTTTMRPTSMDSVKPEHVLMSDDECCRILFSEAISDECFSSEDYNKGVNMVDLLGGPSFLCPSSLPFVPSVVSSTGDRLMYTAESNRLVESEDQQFVSRTQDNTIYASDLSRPPCIHRIDNTEMHEPSDVVKDDSKLVPVNNFGCESDAKSTSYPTDENSNVHTEQNTGALCYEPPRFPSLDIPFLSCDLIQSGGDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSRDDSPDALLKSAAKTFKGTPSILKKRNRDLLSPLSEKRIDKKLEIEMTSTLIKNFSRLDVMFDDNETLGADLLPPSSMPKKDSGTSVEDDKENCGQAVRVERLEEKSKHAILDDKNSEKDSGDGNSQEKIKQPVAVDSAIGNDVSAAVEIVQQPSGVLVEHDMNDLLMYSPDQVNLKSERVPSLSAKTIKNPCSKINSPSVWLKEHERLSVAVTCIHSVSTSGPGENSVDHTGNDGGLETCSIFGGTPFRKSIESPSAWKSPWFINTFLSSPRIDTEITIEDFGYFMSPGDRSYDAIGLMKQINEQTAAQYASAHAILGNETPKALSKGKSRNDGDEDRDDIDPNNQHGDHSQSASSALVERRVLDFSECGTPVKGDSSKSSAMSFSSPTSYLLKGCR* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00605 988 MobiDBLite consensus disorder prediction 658 722 - -
Phac9g00605 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 82 IPR017930 -
Phac9g00605 988 Gene3D - 141 201 - -
Phac9g00605 988 SMART sant 35 84 IPR001005 -
Phac9g00605 988 SMART sant 87 136 IPR001005 -
Phac9g00605 988 SMART sant 139 187 IPR001005 -
Phac9g00605 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 139 189 IPR017930 -
Phac9g00605 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 138 IPR017930 -
Phac9g00605 988 MobiDBLite consensus disorder prediction 960 988 - -
Phac9g00605 988 MobiDBLite consensus disorder prediction 912 948 - -
Phac9g00605 988 SUPERFAMILY Homeodomain-like 32 88 IPR009057 -
Phac9g00605 988 MobiDBLite consensus disorder prediction 209 246 - -
Phac9g00605 988 FunFam Transcription factor MYB3R-2 141 203 - -
Phac9g00605 988 Gene3D - 88 139 - -
Phac9g00605 988 Gene3D - 35 87 - -
Phac9g00605 988 ProSiteProfiles Myb-like domain profile. 83 134 IPR001005 -
Phac9g00605 988 Pfam Myb-like DNA-binding domain 36 82 IPR001005 -
Phac9g00605 988 Pfam Myb-like DNA-binding domain 88 134 IPR001005 -
Phac9g00605 988 Pfam Myb-like DNA-binding domain 140 182 IPR001005 -
Phac9g00605 988 MobiDBLite consensus disorder prediction 673 716 - -
Phac9g00605 988 MobiDBLite consensus disorder prediction 964 982 - -
Phac9g00605 988 FunFam Transcriptional activator Myb isoform A 88 140 - -
Phac9g00605 988 CDD SANT 142 182 IPR001005 -
Phac9g00605 988 ProSiteProfiles Myb-like domain profile. 135 185 IPR001005 -
Phac9g00605 988 ProSiteProfiles Myb-like domain profile. 31 82 IPR001005 -
Phac9g00605 988 CDD SANT 39 82 IPR001005 -
Phac9g00605 988 SUPERFAMILY Homeodomain-like 85 181 IPR009057 -
Phac9g00605 988 FunFam Transcriptional activator Myb isoform A 35 87 - -
Phac9g00605 988 CDD SANT 90 134 IPR001005 -
Phac9g00605 988 MobiDBLite consensus disorder prediction 917 937 - -
Phac9g00605 988 PANTHER MYB PROTEIN-RELATED 36 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00605 Phac-Chr9 4030632 4038313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00605 20 988 MYB Transcription Factor Family AT4G32730 44.348 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g00605 Myb_DNA-binding 2.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00605 - K09420 gmx:100811335 1672.14