Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00575 ATGGAAAGGGAACGTACGCGGAAACGCCCTCGTCTCGCATGGGACGTAGCCCCTCCCACGGTGCCCGAGTCTCAACTGGCTCTGCCGGTACCTGGTGACGAAGGAATTGAAAGAAAACACGCTTCACCTCCGAAAAGGGACGACGATCGCGAAGGACATTATGTCTTCAATCTCGGCGAAAATCTCACTCCTAGATATAAAATCCTCGGCAAGATGGGTGAAGGCACATTTGGTCGGGTATTGGAATGTTGGGACCGTCAAACTAGAGAATATGTGGCTGTCAAGGTAGTTAGAAGCATACGGAAATATCGGGATGCAGCAATGCTCGAGGTTGATGTGCTTCAACATCTAGCGAAGAATGATAGAGGAAATTCACGGTGTGTGCAGATCCGAAATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGATCTGAAGCCAGAAAATATTCTTCTAGTTTCTTCTGAATATGTAAAGCTCCCTAGCTATAAGAGAGTTTCCTCAGATGAAACGCAGTTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCCCATGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGATTATTCTAGGTCTAGGGTGGTCATATCCATGTGATCTGTGGAGCGTTGGATGTATTCTTATCGAACTATGCTCGGGTGAAGCGTTGTTTCAGACTCACGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTATTCCGGAGAACATGATTCGAAGGTCCAATAAGGGAGCAGAAAAGTATTTCAAGCGTGGATCAAGACTAAGATGGCCTGAAGGAGCTATTTCAAGGGAGAGCATCAATGCAGTAAAGAAGCTTGGTCATCTGAAGTTGGATGTGCAGTACGAAAACTCTACTAGCACAACAAGGCTTAGGGGAACATACTTAACAAGTTCAGGGGTGGATAACACAAACTTGGTCTGTGCTGAAGTAGGCCAAAGGCGAAAGGGAAGGGGAAGGGAATGA 1185 0.4515 MERERTRKRPRLAWDVAPPTVPESQLALPVPGDEGIERKHASPPKRDDDREGHYVFNLGENLTPRYKILGKMGEGTFGRVLECWDRQTREYVAVKVVRSIRKYRDAAMLEVDVLQHLAKNDRGNSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYVKLPSYKRVSSDETQFRCLPKSSAIKLIDFGSTAHDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPENMIRRSNKGAEKYFKRGSRLRWPEGAISRESINAVKKLGHLKLDVQYENSTSTTRLRGTYLTSSGVDNTNLVCAEVGQRRKGRGRE* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00575 394 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 37 351 - -
Phac9g00575 394 MobiDBLite consensus disorder prediction 33 52 - -
Phac9g00575 394 CDD PKc_CLK 53 356 - -
Phac9g00575 394 FunFam Serine/threonine-protein kinase AFC2 142 368 - -
Phac9g00575 394 Gene3D Phosphorylase Kinase; domain 1 53 146 - -
Phac9g00575 394 SMART serkin_6 66 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00575 394 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00575 394 FunFam Serine/threonine-protein kinase AFC2 53 146 - -
Phac9g00575 394 Gene3D Transferase(Phosphotransferase) domain 1 120 341 - -
Phac9g00575 394 Pfam Protein kinase domain 66 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00575 394 MobiDBLite consensus disorder prediction 1 52 - -
Phac9g00575 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Phac9g00575 394 SUPERFAMILY Protein kinase-like (PK-like) 53 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00575 Phac-Chr9 3714697 3721464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00575 56 329 MAP Kinase Kinase Kinase AT3G13530 28.070 5.24e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Phac9g00575 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00575 K08287 - gmx:100782453 690.263