Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00573 ATGGAAAGGGAACGTACGCGGAAACGCCCTCGTCTCGCATGGGACGTAGCCCCTCCCACGGTGCCCGAGTCTCAACTGGCTCTGCCGGTACCTGGTGACGAAGGAATTGAAAGAAAACACGCTTCACCTCCGAAAAGGGACGACGATCGCGAAGGACATTATGTCTTCAATCTCGGCGAAAATCTCACTCCTAGATATAAAATCCTCGGCAAGATGGGTGAAGGCACATTTGGTCGGGTATTGGAATGTTGGGACCGTCAAACTAGAGAATATGTGGCTGTCAAGGTAGTTAGAAGCATACGGAAATATCGGGATGCAGCAATGCTCGAGGTTGATGTGCTTCAACATCTAGCGAAGAATGATAGAGGAAATTCACGGTGTGTGCAGATCCGAAATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGATCTGAAGCCAGAAAATATTCTTCTAGTTTCTTCTGAATATGTAAAGCTCCCTAGCTATAAGAGAGTTTCCTCAGATGAAACGCAGTTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCCCATGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGATTATTCTAGGTCTAGGGTGGTCATATCCATGTGATCTGTGGAGCGTTGGATGTATTCTTATCGAACTATGCTCGGGTGAAGCGTTGTTTCAGACTCACGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTATTCCGGAGAACATGATTCGAAGGTCCAATAAGGGAGCAGAAAAGTATTTCAAGCGTGGATCAAGACTAAGATGGCCTGAAGGAGCTATTTCAAGGGAGAGCATCAATGCAGTAAAGAAGCTTGGTCATCTGAAGCTATCATGA 1059 0.4485 MERERTRKRPRLAWDVAPPTVPESQLALPVPGDEGIERKHASPPKRDDDREGHYVFNLGENLTPRYKILGKMGEGTFGRVLECWDRQTREYVAVKVVRSIRKYRDAAMLEVDVLQHLAKNDRGNSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYVKLPSYKRVSSDETQFRCLPKSSAIKLIDFGSTAHDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPENMIRRSNKGAEKYFKRGSRLRWPEGAISRESINAVKKLGHLKLS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00573 352 ProSiteProfiles Protein kinase domain profile. 66 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00573 352 MobiDBLite consensus disorder prediction 33 52 - -
Phac9g00573 352 CDD PKc_CLK 53 351 - -
Phac9g00573 352 Gene3D Phosphorylase Kinase; domain 1 53 146 - -
Phac9g00573 352 FunFam Serine/threonine-protein kinase AFC2 53 146 - -
Phac9g00573 352 Pfam Protein kinase domain 66 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00573 352 Gene3D Transferase(Phosphotransferase) domain 1 120 338 - -
Phac9g00573 352 FunFam Serine/threonine-protein kinase AFC2 142 351 - -
Phac9g00573 352 SMART serkin_6 66 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00573 352 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 37 350 - -
Phac9g00573 352 MobiDBLite consensus disorder prediction 1 52 - -
Phac9g00573 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Phac9g00573 352 SUPERFAMILY Protein kinase-like (PK-like) 53 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00573 Phac-Chr9 3714697 3721464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00573 56 329 MAP Kinase Kinase Kinase AT3G13530 28.070 3.15e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Phac9g00573 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00573 K08287 - gmx:100782453 689.878