Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00572 ATGCTCGAGGTTGATGTGCTTCAACATCTAGCGAAGAATGATAGAGGAAATTCACGGTGTGTGCAGATCCGAAATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGATCTGAAGCCAGAAAATATTCTTCTAGTTTCTTCTGAATATGTAAAGCTCCCTAGCTATAAGAGAGTTTCCTCAGATGAAACGCAGTTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCCCATGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGATTATTCTAGGTCTAGGGTGGTCATATCCATGTGATCTGTGGAGCGTTGGATGTATTCTTATCGAACTATGCTCGGGTGAAGCGTTGTTTCAGACTCACGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTATTCCGGAGAACATGATTCGAAGGTCCAATAAGGGAGCAGAAAAGTATTTCAAGCGTGGATCAAGACTAAGATGGCCTGAAGGAGCTATTTCAAGGGAGAGCATCAATGCAGTAAAGAAGCTTGGTCATCTGAAGGATATTGTATCTCGAAGTGTGGACTCTTCAAGGTCCTCCTTAACTGACTTGTTACATGGCTTATTATCATATGACCCAACCAAACGGCTAACAGCTCTTCAAGCCCTCGATCATCCCTTCTTTAGGATTCCAACCTGA 867 0.4245 MLEVDVLQHLAKNDRGNSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYVKLPSYKRVSSDETQFRCLPKSSAIKLIDFGSTAHDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPENMIRRSNKGAEKYFKRGSRLRWPEGAISRESINAVKKLGHLKDIVSRSVDSSRSSLTDLLHGLLSYDPTKRLTALQALDHPFFRIPT* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00572 288 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 285 - -
Phac9g00572 288 SUPERFAMILY Protein kinase-like (PK-like) 2 285 IPR011009 -
Phac9g00572 288 Gene3D Transferase(Phosphotransferase) domain 1 13 284 - -
Phac9g00572 288 CDD PKc_CLK 1 284 - -
Phac9g00572 288 Pfam Protein kinase domain 17 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00572 288 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00572 288 Gene3D Phosphorylase Kinase; domain 1 3 39 - -
Phac9g00572 288 FunFam Serine/threonine-protein kinase AFC2 35 284 - -
Phac9g00572 288 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00572 288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00572 Phac-Chr9 3714697 3721464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00572 3 284 Core Cell Cycle Gene Families AT1G76540 24.828 6.67e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Phac9g00572 Pkinase 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00572 K08287 - gmx:100782453 545.428