Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00566 ATGCAAAAGGAAAAGGAAGCCATTATCAAGGAGGGAACGGATACAGAAATGGAAGGAACTCTTCCAAAAGAAGAAACCCTACCACCGGGATTTCGATTTCATCCTACCGATGAAGAACTTGTCACTTGCTATCTCCTAAATAAGATATCGGATTCTAATTTTACAGGCAGAGCAATAACTGATGTAGATCTCAACAAAAGTGAGCCATGGGAGCTTCCAGGGAAAGCTAAGATGGGTGAAAAAGAATGGTACTTCTTCAGTCTGAGAGACCGTAAATACCCAACTGGTGTGAGAACCAATCGAGCAACGAACACGGGGTATTGGAAGACAACAGGAAAAGACAAGGAGATCCTTAACAGTGCAACATCGGAATTGATTGGCATGAAGAAGACTTTGGTTTTCTACAAAGGAAGAGCACCCAGAGGAGAGAAAAGCAACTGGGTCATGCATGAATACCGTATGCACTCAAAATCCACCTTCAGAACTACCAGGGATGAATGGGTGGTTTGCAGGGTGTTCAAGAAGAGTGGCGGGGCAAAAAAGTTCCCTTCCTCCAACCATGCAAGAGCAGTGAATCCGTACAGCTTGGAAATAGGGCCAAATATTATGGCACCACCAGTGATGCAATTGGGAGATCCTTCTGCTCATTTCCTTTATGGACGGAACTACATGAGCAGTGTTGAGTTAGGTGAACTTGCAAGGGTTTTAAGAGGAAGTGGATCAACAAGTAGTGTCAATCAACCAATGCAATCCCAATTGGGCTACCCTACATCAGCAGCAGCAGGAGGAGGAGGAGGAGGATTCACCATTTCAGGACTCAATTTGAATCTGGGAGGAGGAGGAGGAGGAGCAACAAGCACAACACAACCCATTTTTCGACCAATGCAACCTTCTTCTGCTGCTCCTGTTCATACAATGGCTCAAGTAGTTGATGTGAATTCCAGCATGATGACAAGTGGTTCTCTTGGTGCAGATGTAGGTTATGGATCAGAATTGAGTAACATGAATTCTCATGGGAATAGGTTTATGGGAATGGAGCATTGCATGGATCTAGACAACTATTGGCCTTCCTACTAA 1077 0.4448 MQKEKEAIIKEGTDTEMEGTLPKEETLPPGFRFHPTDEELVTCYLLNKISDSNFTGRAITDVDLNKSEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRMHSKSTFRTTRDEWVVCRVFKKSGGAKKFPSSNHARAVNPYSLEIGPNIMAPPVMQLGDPSAHFLYGRNYMSSVELGELARVLRGSGSTSSVNQPMQSQLGYPTSAAAGGGGGGFTISGLNLNLGGGGGGATSTTQPIFRPMQPSSAAPVHTMAQVVDVNSSMMTSGSLGADVGYGSELSNMNSHGNRFMGMEHCMDLDNYWPSY* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00566 358 MobiDBLite consensus disorder prediction 1 21 - -
Phac9g00566 358 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Phac9g00566 358 ProSiteProfiles NAC domain profile. 27 175 IPR003441 GO:0003677|GO:0006355
Phac9g00566 358 MobiDBLite consensus disorder prediction 1 29 - -
Phac9g00566 358 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 226 - -
Phac9g00566 358 FunFam NAC domain-containing protein 100-like 36 179 - -
Phac9g00566 358 SUPERFAMILY NAC domain 23 175 IPR036093 GO:0003677|GO:0006355
Phac9g00566 358 Gene3D NAC domain 36 178 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00566 Phac-Chr9 3697678 3700299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00566 23 358 NAC Transcription Factor Family AT2G24430 52.408 5.06e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac9g00566 NAM 4.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00566 - - gmx:100805060 602.438