Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00549 ATGGCACATAAAGTAGACTACTGCTGTCTTCTCATGCTCTTGATCACTTGGTTTTTGCCCTCATTGGCTGACAATGCTCAAGTTCTGATGAACTTCAAAAGATTCTTGTCCAATGCTGATGCTTTAAATAACTGGGGGAACCAATCAATTGGTGTGTGCAGCTGGACTGGTATATTGTGTTTCAATCAAAATTTTCATGGCTTGAGATTAGAAAACATGGGACTAAGTGGCACTGTTGACGTAGACACGCTGCTTCAGTTGACCAATTTGAACAGCTTTAGTGTCATTAACAACAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGATTGTGAGTTTAAGAGCGCTGTTTCTGAGCAATAACAAGTTCTCTGGTGAAATTCCAGATGATGCTTTTGAAGGCATGAAACGTCTTAAGAGAGTATTCTTGGCTGAAAATGGGTTCACGGGTCATATTCCTACTTCCTTGGCTAAATTGCCTAATCTTTTGGATGTGGACATACATGGAAATAGTTTTGAAGGAAACATACCAGAATTTCAACAGAGGGATTTCAGAGTGTTTAATTTATCTTACAACAAGTTAGAGGGTCAAATACCAGAAAGCTTAAGCAGCAGGGATCCTGGCTCATTTGCTGGCAATCAAGGTCTATGTGGAAAGCCTCTAAGTCCCTGCATTGGAAGCCCCACCTCACCCCCGAACACAGACACAGATGAACACCCAAATTCACATCCTGAAAAAGAAAACAAGAAAAAACGCGTTATTTTAACAGTTATTGTAGTGGTGGGGGTGATTGTGCTGGCTTCAATAGTAGCACTTTTGATCATCCGTTACCGTCGAAAGAAACCCGAACTGGTAAAAGATGCACAACCCCAGAACGTTCCTCCTTTTTCTAGCGAGTCCAAATCCATTGTTCTGACAACTGAACCCAAGAAAAGTGAAGACGGAGGGTTGAACTTCGTTAAGAACGAGAGGGAGGGGATTGACATGCAAGACTTGCTAAGGGCCTCGGCTGAGGTTCTGGGGAGTGGCAGTTTTGGATCCACGTACAAGGCCATGCTTCTGAACGGGCCAGTGGTGGTGGTGAAGAGATTCAAGCACATGAACAACGTGGGGAAGAAAGAGTTTTTTGAGCACATGAACAGGCTTGGAAAACTGTCACACCCCAATCTGCTCCCTCTCGTTGCATTCTACTACGGAAAAGAAGAGAAGCTTTTGGTTCACGACTTCGCTGAAAATGGCAGCTTGGCAAGTCATCTTCATGGAAGAAGTGGCGTTGAGTTGAACTGGGGAACTCGTTTGAAGATCATAAAAGGAGTGGCCAGGGGGTTGGCTTATCTGTACACGGAGTTCCCCGACCAAGCTTTACCACACGGTCATCTGAAATCGTCTAACGTTGTACTGGACGGTTCCTTCGAGGCTCGCTTGGCAGAGTACGGCCTTGTGCCGGTGGTGGAGAGGAGCCACGCTCAGCAGTTCATGGTGGCTTACAAGTCTCCGGAGGCGAGCCAGTTGGAGAAGCCGAGCGAGAAGAGCGATGTGTGGTGTCTGGGGATTCTGATACTGGAGCTTTTGACGGGGAAGTTCCCTGCGAATTATCTGAGGCATGGGAAGGGAGCGAGTGAGGATTTGGCGGCGTGGGTGAACTCGATAGTGGGGGAAGGGTGGAATGGGGAGGTGCTTGATAAGGGGATTCCAGGGAGAGGGAGTGGAGAGGGTGAGATGGTGAAGCTTTTGAGGATTGGAATGGGATGCTGTGAATGGAAGTTGGAGAGTAGGTGGGGTTGGAAGGAGGCTGTGTCAAAGATTGAGGAGTTGAAGGAGAGTGACGATGGTGGTGAAGGGGACAATCTCAACTCACTCTCTACCAGTCTCGATGACTTCTCTCTCTCACACTCTACTTCATGA 1905 0.4693 MAHKVDYCCLLMLLITWFLPSLADNAQVLMNFKRFLSNADALNNWGNQSIGVCSWTGILCFNQNFHGLRLENMGLSGTVDVDTLLQLTNLNSFSVINNNFEGPMPEFKKIVSLRALFLSNNKFSGEIPDDAFEGMKRLKRVFLAENGFTGHIPTSLAKLPNLLDVDIHGNSFEGNIPEFQQRDFRVFNLSYNKLEGQIPESLSSRDPGSFAGNQGLCGKPLSPCIGSPTSPPNTDTDEHPNSHPEKENKKKRVILTVIVVVGVIVLASIVALLIIRYRRKKPELVKDAQPQNVPPFSSESKSIVLTTEPKKSEDGGLNFVKNEREGIDMQDLLRASAEVLGSGSFGSTYKAMLLNGPVVVVKRFKHMNNVGKKEFFEHMNRLGKLSHPNLLPLVAFYYGKEEKLLVHDFAENGSLASHLHGRSGVELNWGTRLKIIKGVARGLAYLYTEFPDQALPHGHLKSSNVVLDGSFEARLAEYGLVPVVERSHAQQFMVAYKSPEASQLEKPSEKSDVWCLGILILELLTGKFPANYLRHGKGASEDLAAWVNSIVGEGWNGEVLDKGIPGRGSGEGEMVKLLRIGMGCCEWKLESRWGWKEAVSKIEELKESDDGGEGDNLNSLSTSLDDFSLSHSTS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00549 634 ProSiteProfiles Protein kinase domain profile. 334 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00549 634 MobiDBLite consensus disorder prediction 605 634 - -
Phac9g00549 634 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 81 176 - -
Phac9g00549 634 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Phac9g00549 634 Gene3D Phosphorylase Kinase; domain 1 302 409 - -
Phac9g00549 634 Gene3D Transferase(Phosphotransferase) domain 1 410 622 - -
Phac9g00549 634 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Phac9g00549 634 SUPERFAMILY Protein kinase-like (PK-like) 338 604 IPR011009 -
Phac9g00549 634 Gene3D Ribonuclease Inhibitor 185 224 IPR032675 -
Phac9g00549 634 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 609 IPR046959 -
Phac9g00549 634 MobiDBLite consensus disorder prediction 614 634 - -
Phac9g00549 634 SUPERFAMILY L domain-like 24 204 - -
Phac9g00549 634 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Phac9g00549 634 MobiDBLite consensus disorder prediction 221 248 - -
Phac9g00549 634 Pfam Protein tyrosine and serine/threonine kinase 338 531 IPR001245 GO:0004672|GO:0006468
Phac9g00549 634 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00549 Phac-Chr9 3558652 3561151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00549 5 626 Receptor kinase-like Gene Family AT5G35390 45.146 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac9g00549 PK_Tyr_Ser-Thr 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00549 - - gmx:100803999 985.326