Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00542 ATGTGGTTGCCAAAGAATCGGACAGAGAAAAAGGATGGTGTGAGTGGATTAGTAGCAGTGGCAATTGATAAAAAGAAAGGGAGCCAAACTGCACTCAAATGGGCAGTTGACAATCTCCTCATCAGAAGTGCAACTGTAATTCTCATCCATGTCAAGCTTCTTGCACCAACTCTATCTCCATCACCTTCTCTTTTCGTCCCTAGGATAACTGCTTTCCTTGGTGATGATAGTTCAGTGGTGAGCAAAGAACACGAATGCCAAAACAAAAATCTTTTCCTCCCATATCGTGTCTTCTGTACACGAAAAGATATACATTGCAAGGATGTCCTGCTAGAAGATTCAGATGTATCCAAAGCTATAACTGAATATGCTTCTCAGACAGGAATTGAGCATCTGGTTCTTGGCACTTCAGCAAAAACTAGTTTGCTCAAAAGATTCAAGGTATCAGATATTCCAGGAGAAATTTCAAAAGGGGCGCCAGATTTCTGCAACGTCTATGTTATTGCCAAAGGAAAGATTCAAACAATGCGATCTGCTACTCGTCAACCACCGACCAGTTTCCCTAACCTGGTCTATCAAGGTAGTGTCAGGTCAAACATTTCAGACCCAAATATGCATTCGGATCAAAGCATAAAAGAAGAACAATCGCATTCCTTTGATTCTGCATCACAGTATGATGAATCGTTCAGGTCACCATTTACTAGGAAACATTACATTGGCAGACACTATGGGGACACTCCCAATTCAGATACGGACATATCCTTTGTAAGCACTGGAAGGAAAAGCACAGACCGCTTGATCCCTTCATTGAACTTAGATACCGGAATATCCAATCCTCGGCTATCATATAGCTCAGACAATGATGCAAACTTGAGTTTTGAGTCAATACATTGTGGAAGGAAGTCTCTGGAATTGAACAGTCCTAATGAATTCACATCATTCTCATTTGAGAGTGACAACCAATCTTTTACATCACAAACAGGGGATGACGTGGAGGCTGAAATGAGGAGATTGAAGTTGGAGCTGAAGCAGACCATGGAAATGTATAACACGGCTTGTAAAGAAGCACTCACAGCAAATCAGAAGGCATTGGAACTTCAGCAGTGGAAAATGGAGGAAGAGATGAAAATGGAAGAAGCAAGGCTGGCTAGCGAAAAAGCACTGGCAATGGCAGAAAAGGAGAAAGCCAAGTCTAAAGCAGCCATTGAGACTGCTGAAGCACAAAAGAGAATTGCAGAACTGGAAGCACAGAAGAGACTCGATGCAGAAATGAAAGCACATAGAGAATCAGAAGAGAAAAGAAAAGTGCTTGATGCTTTGGTAAATGTAGATATCAGGTATAGAAAGTACACTATTGAGGAGATTGAAGAGGCAACAAATTTTTTTTCAGAATCCCTTAAAATTGGAGAAGGGGGATATGGTCCCGTTTTTAAGTGCCATTTGGATCACACACCTGTTGCAGTTAAGGTTCTACGCCCAGATGCACAACAAGGAAGATCACAGTTTCAGAAAGAGGTTGAGGTATTGAGCTGCATACGGCATCCAAACATGGTTCTACTCCTAGGAGCATGTCCAGAATATGGATGTCTGGTGTATGAGTATATGGCAAATGGAAGCTTGGACAATTGCCTCTTTCGAAAAGGCAACACTCCCCCACTTCCTTGGCAGCTAAGGTTCAAGATAGCAGCTGAGATTGGCACAGCCTTGCTGTTCCTGCACCAGACAAAACCAGAACCTCTGGTGCACAGGGACTTGAAACCAGGCAACATCTTGCTTGACAGAAACTTTGTGTCAAAAATCAGTGATGTAGGCTTGGCCAGGCTAGTTCCACCATCTGTGGCAGACAATGTCACGCAATATCACATGACATCCGCAGCCGGAACCTTCTGCTACATAGATCCTGAGTACCAGCAGACAGGAATGTTAGGGGTGAAATCAGACATATACTCCCTTGGGATAATTTTTTTGCAACTCTTGACAGCAAAAGCACCTATGGGTTTGACCCATCATGTTGAAAGGGCCATTGAGAAAGGAACTTTAGCTGAGATTTTGGATCCATCACTCTCTGATTGGCCACAAGAGGAGGCCTTGAAATTTGCCAAGTTGGCAGTTCAGTGTGCTGAATTAAGGCGCAAAGACAGACCTGATCTTGGCAAGGTTATCCTACCAGAACTCCATAGACTAAGAAACCTTGCTGAAGATAGTGATCTTATTTCAGCTTTGGGTAAACCTACGAATGTGACCCGAGACAGACATGTTTCTGTGGTACTGGAAGGAGAGTGTCCTCACCCGGTCTCAGGGGCATTAAGAGCTAACAATTCAGTGTCTTGA 2331 0.4324 MWLPKNRTEKKDGVSGLVAVAIDKKKGSQTALKWAVDNLLIRSATVILIHVKLLAPTLSPSPSLFVPRITAFLGDDSSVVSKEHECQNKNLFLPYRVFCTRKDIHCKDVLLEDSDVSKAITEYASQTGIEHLVLGTSAKTSLLKRFKVSDIPGEISKGAPDFCNVYVIAKGKIQTMRSATRQPPTSFPNLVYQGSVRSNISDPNMHSDQSIKEEQSHSFDSASQYDESFRSPFTRKHYIGRHYGDTPNSDTDISFVSTGRKSTDRLIPSLNLDTGISNPRLSYSSDNDANLSFESIHCGRKSLELNSPNEFTSFSFESDNQSFTSQTGDDVEAEMRRLKLELKQTMEMYNTACKEALTANQKALELQQWKMEEEMKMEEARLASEKALAMAEKEKAKSKAAIETAEAQKRIAELEAQKRLDAEMKAHRESEEKRKVLDALVNVDIRYRKYTIEEIEEATNFFSESLKIGEGGYGPVFKCHLDHTPVAVKVLRPDAQQGRSQFQKEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDNCLFRKGNTPPLPWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADNVTQYHMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQLLTAKAPMGLTHHVERAIEKGTLAEILDPSLSDWPQEEALKFAKLAVQCAELRRKDRPDLGKVILPELHRLRNLAEDSDLISALGKPTNVTRDRHVSVVLEGECPHPVSGALRANNSVS* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00542 776 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 146 - -
Phac9g00542 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Phac9g00542 776 MobiDBLite consensus disorder prediction 198 226 - -
Phac9g00542 776 Pfam Universal stress protein family 18 145 IPR006016 -
Phac9g00542 776 SUPERFAMILY Protein kinase-like (PK-like) 445 720 IPR011009 -
Phac9g00542 776 Coils Coil 388 417 - -
Phac9g00542 776 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 434 534 - -
Phac9g00542 776 FunFam U-box domain-containing protein 51 535 735 - -
Phac9g00542 776 CDD STK_N 17 171 - -
Phac9g00542 776 Pfam Protein kinase domain 464 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00542 776 Coils Coil 328 348 - -
Phac9g00542 776 Gene3D Transferase(Phosphotransferase) domain 1 535 740 - -
Phac9g00542 776 Gene3D HUPs 17 168 IPR014729 -
Phac9g00542 776 PANTHER OS02G0152300 PROTEIN 18 752 - -
Phac9g00542 776 ProSiteProfiles Protein kinase domain profile. 462 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g00542 776 Gene3D Phosphorylase Kinase; domain 1 441 534 - -
Phac9g00542 776 SMART serkin_6 462 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00542 Phac-Chr9 3535338 3540694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00542 1 735 Receptor kinase-like Gene Family AT1G78940 56.159 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phac9g00542 Pkinase 7.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00542 - - gmx:100803867 1143.26