Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00528 ATGGCAGTGGAGTTGATGAGCTTGCCGAAAATGGAGGAACAGAAGGCAATTGAAGAAGCAGCGACGTTGGGCCTGAAGGGAATGGAAAACTTCATCCATCTCCTCTCCCACCAATCCTCCAATCTCAACACTCACCTCACCCACGCAACCGTTTCAAACTTCAAAAAACTCATCTCCTTACTCAACAGAACCGGCCACGCCCGTTTCCGCCGCGCACCTCTCCCTTCAAACACCCACCCCATTCCGCCGGCTAACCCGGTTCCCCTCCACCAACCTCCCTCGCACACTCTCACTCTCGATTTCACCAAACCTAACATCTTCGCCTCCACCGACGCCAAGTCCACGGATCTCGAATTCTCCAAGGAAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATCTCCTCCGCCCTCACCGCCGACGGCAGCGTCTCCAACGGCAACCAAGCCTCCTCTCTCTTCCTCACCCCGCCTCCGCCGCCCTCTTCCTCCGGAAAACCACCTCTCCTCAAGAAGAGGTGCCACGAACACTCCGGCGACGTCTCCGGTAAACTCTCCGGCTCCACCAAGTGCCACTGCATTAAGAAAAGGAAAAACCGGGTGAAGAAGACGGTGAGAGTGCCGGCGATTAGTGCGAAGATCGCCGATATTCCGTCGGACGAGCACTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGATCACCGTACCCGAGGGGGTATTACAAGTGCAGTACGGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGTGCTTCGGACGATCCCACGATGTTGATTGTGACGTACGAGGGGGAGCACCGTCACTCCTTTCAGCCCGCGATGCAGGACAACATTTCCGGCGCCATGGGTTTGGTTTTTCAGTCAAAATAG 891 0.5657 MAVELMSLPKMEEQKAIEEAATLGLKGMENFIHLLSHQSSNLNTHLTHATVSNFKKLISLLNRTGHARFRRAPLPSNTHPIPPANPVPLHQPPSHTLTLDFTKPNIFASTDAKSTDLEFSKETFSVSSNSSFISSALTADGSVSNGNQASSLFLTPPPPPSSSGKPPLLKKRCHEHSGDVSGKLSGSTKCHCIKKRKNRVKKTVRVPAISAKIADIPSDEHSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERASDDPTMLIVTYEGEHRHSFQPAMQDNISGAMGLVFQSK* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00528 296 Pfam Plant zinc cluster domain 170 215 IPR018872 -
Phac9g00528 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 280 IPR044810 GO:0003700
Phac9g00528 296 SUPERFAMILY WRKY DNA-binding domain 215 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g00528 296 MobiDBLite consensus disorder prediction 148 180 - -
Phac9g00528 296 Pfam WRKY DNA -binding domain 219 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g00528 296 FunFam WRKY transcription factor 65 201 278 - -
Phac9g00528 296 Gene3D WRKY domain 203 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g00528 296 SMART WRKY_cls 217 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g00528 296 ProSiteProfiles WRKY domain profile. 212 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00528 Phac-Chr9 3469734 3471494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00528 1 295 WRKY Transcription Factor Family AT2G24570 59.077 9.31e-111 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac9g00528 WRKY 7.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00528 - - gmx:100127394 427.172