Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00512 ATGTGGAACCCCTTGTCATGGGTTATGGAAGCTGCTGCTATAATGGCCATTGCTTTGGCCAATGGCGGAGGAAGGCCTCCGGATTGGCAAGATTTCGTTGGTATCATTGCTCTCTTGATCATTAACTCCACCATCAGTTTCATCGAAGAAAACAATGCTGGTAATGCTGCTGCTGCACTCATGGCTGGCTTAGCTCCCAAGACCAAGATATTGAACCTCTGCAACTGCAAAGAGGATGTCAGAAAGAGGGTTCATGGAGTGATTGACAAGTTTGCTGAGCGTGGGCTCCGTTCGTTAGGCGTCGCTAAACAGGAGGTACCTGAGAAAAACAAGGATAGTCCTGGTGCACCATGGCAATTTGTTGGTCTGCTACCACTTTTCGATCCTCCAAGGCACGATAGTGCGGAAACCATCACAAGAGCTCTGAACCTTGGTGTGAATGTTAAGATGATTACAGGTGATCAGCTTGCCATTGCCAAGGAAACTGGCCGAAGGCTTGGGATGGGAACAAACATGTACCCGTCTTCTTCATTGCTTGGCCAGAGCAAGGATGCTTCTGTTTCAGCTCTTCCAGTTGATGAATTGATTGAGAAAGCTGATGGATTTGCTGGAGTATTTCCCGAACACAAATATGAAATCGTGAAGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGTGATGGTGTCAACGACGCCCCTGCATTAAAGAAAGCAGACATTGGAATTGCTGTTGCTGACGCCACAGATGCTGCTAGAAGTGCCTCTGACATTGTCCTCACTGAACCTGGTCTGAGTGTCATAATTAGTGCAGTGCTCACCAGTAGGGCAATTTTCCAAAGGATGAAGAATTATACTATCTATGCAGTGTCAATCACCATTCGTATAGTGTTTGGTTTCATGTTTATTGCATTGATTTGGAAATTTGATTTTGCACCCTTCATGGTGTTGATTATTGCAATACTAAACGATGGTACCATCATGACAATATCCAAGGATCGAGTGAAACCATCTCCACTGCCAGACAGCTGGAAGCTGAGGGAGATATTTGCCACTGGTGTTGTGCTAGGTACTTACATGGCACTAATGACAGTAGTATTTTTCTGGCTCATGAAGGATACCGATTTCTTCTCGGACAAGTTTGGTGTGAGGTCTATAAGAAATAGCCCAGGAGAAATGATGGCAGCCCTGTACCTACAAGTCAGTATTATAAGTCAAGCACTGATTTTTGTCACCAGGTCCCGCAGCTGGTCTTATGTTGAAAGACCTGGTCTTCTCCTACTGGGTGCTTTTATGATTGCACAGCTGGTGGCAACTTTTCTAGCAGTATATGCTAACTGGGACTTTGCAAGAATTAAGGGAATGGGATGGGGTTGGGCTGGCGTAATCTGGCTCTACAGTTTAGTGACATATGTTCCGCTTGATATACTTAAATTCGCAATCCGCTATGTTCTGAGTGGGAAGGCTTGGGACAATCTTTTGGAGAACAAGACTGCCTTCACTACAAAGAAAGACTATGGAAAAGAAGAGAGAGAAGCACAGTGGGCAACTGCACAAAGAACTCTTCACGGTCTTCAGCCACCTGAAACAACCAACCTTTTCAATGACAAGAATAGTTATAGGGAGCTTTCAGAGATTGCTGAACAAGCTAAGAGACGTGCTGAGGTTGCCAGACTCAGGGAGCTTCATACTCTGAAAGGACATGTTGAGTCAGTGGTGAAGCTGAAAGGACTTGACATTGACACAATCCAACAGCATTACACAGTTTAA 1773 0.4506 MWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLIINSTISFIEENNAGNAAAALMAGLAPKTKILNLCNCKEDVRKRVHGVIDKFAERGLRSLGVAKQEVPEKNKDSPGAPWQFVGLLPLFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDASVSALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGTYMALMTVVFFWLMKDTDFFSDKFGVRSIRNSPGEMMAALYLQVSIISQALIFVTRSRSWSYVERPGLLLLGAFMIAQLVATFLAVYANWDFARIKGMGWGWAGVIWLYSLVTYVPLDILKFAIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQPPETTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00512 590 Gene3D - 72 127 IPR023299 GO:0000166
Phac9g00512 590 SUPERFAMILY HAD-like 82 274 IPR036412 -
Phac9g00512 590 Gene3D - 539 590 - -
Phac9g00512 590 PRINTS H+-transporting ATPase (proton pump) signature 258 283 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g00512 590 PRINTS H+-transporting ATPase (proton pump) signature 199 215 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g00512 590 PRINTS H+-transporting ATPase (proton pump) signature 227 243 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g00512 590 PRINTS H+-transporting ATPase (proton pump) signature 399 420 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g00512 590 PRINTS H+-transporting ATPase (proton pump) signature 84 102 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g00512 590 FunFam Plasma membrane ATPase 120 275 - -
Phac9g00512 590 Coils Coil 541 561 - -
Phac9g00512 590 Gene3D - 128 264 IPR023214 -
Phac9g00512 590 FunFam Membrane H(+)-ATPase1 67 127 - -
Phac9g00512 590 FunFam ATPase 4 plasma membrane-type 211 454 - -
Phac9g00512 590 Pfam haloacid dehalogenase-like hydrolase 121 241 - -
Phac9g00512 590 PANTHER CALCIUM-TRANSPORTING ATPASE 1 71 - -
Phac9g00512 590 PRINTS P-type cation-transporting ATPase superfamily signature 250 262 - -
Phac9g00512 590 PRINTS P-type cation-transporting ATPase superfamily signature 227 246 - -
Phac9g00512 590 PRINTS P-type cation-transporting ATPase superfamily signature 144 154 - -
Phac9g00512 590 PRINTS P-type cation-transporting ATPase superfamily signature 122 133 - -
Phac9g00512 590 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 486 IPR023298 -
Phac9g00512 590 NCBIfam HAD-IC family P-type ATPase 202 317 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g00512 590 Gene3D - 1 71 - -
Phac9g00512 590 Gene3D - 265 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00512 Phac-Chr9 3356218 3363428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00512 65 590 Primary Pumps ATPases AT2G24520 87.262 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00512 K01535 - gmx:547525 1000.35