Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00487 ATGGAGGATCAAGCGAATCAAGCGCCACCGCCGCACGATGAAGACGAGGATTCTAAGAAGGAAGAAGACGAATTGATTACGAAGGTTAACAAACTCATGGAGAAGATCACTTCTGCACCTGATAACCCTAAGGCCACCGTTCTCCACGCCCTTGCCTCTATTCTCGAAACACAAGAGTCACGATACATGGACGAGAATGGTCATTCTTCCTCTAGTACTGCCCGTGCTGCGCATGTCATTGGTCGTCTTGGCGGTTTAATTCGGGAAAATGATGAGTTTTTTGAGTTGATATCTTCAAAGTTTCTGTCAGAAACAAGATACTCAACTTCTATTCGAGCTGCTGCTGGAAGACTTCTCCTATGCTGTTCCCTAACATGGATTTATCCTCATGTTTTTGAAGAACCGGTCATGGAAAACATAAAAAATTGGGTGATGGATGATAATACTGGGATGTCTTCTGAAGAGCAGAATCTGAAGCAAAGTTCAGGGAAAAGGGAGGCATCGGACTCTGAAATGTTGAAAACCTATTCTACCGGACTCCTTGCTGTTTGTTTGGTTGGTGGAGGTCAAATTGTGGAAGATGTATTGACATCAGGCTTGTCAGCTAAACTTATGCGATACCTTCGTTTACGTGTTCTGGGAGAGACAAGTAGCAACCAGAAAGATGTTACTCATATAACAGAGAGTAGGCATGCATCTGCAAATACTTCAGGGAGAGGTAGAGACGATGGTCGTGGTAGATTTCGCCAGATCCTTGAACCAAATCATTTGGATGATACAAGGATGATTGATGAGAGATCTTTAGATGATGCAACTCTTGAAAGGGGTCCAGATAGAAGCATTAGTGGACAAACACTTCAAGAAGGATCTTGGATGGAAGGTAAACCACCTGATGGGCTTGGTGAAGGTGTTGAAGTCCAGGAGGTGGATTCTGATGGGGAGGATAGATGGCGCTATAAGGATACACGTGATGGAAGGACAAAATACAGTGAACACGATGACAATGTTAGAGATGACTCTTCAAGGCGACGTTCAAACCGTGGATGGGGAAGATCTAAAGGGAAAGGAAGGGTTAATGAAGGGACTGTAGAAAGTGATTCCATTTTATCATCTCCTGGTTCTGGTAGTCGATTTGTACATGGTCGGAGAGATAGAAGTGTACTGAGGAATGCTGATGTTAGGAGGGTGGCTGATTCTAAGAAGATTCCTGGCAGGGCCTCTTTGGAGGCTTCTGGTTTTGAAAGAGAGGATCATGATGACTGTTTCCATGAATGCCGAATTGGAAATAAAGATATAACCGATCTTGTCCGGAAAGCAGTTCAAGCTGCTGAAGCCGAAGCTAGATCAGCCAATGCACCTGAAGAAGCTGTCAAAGCAGCTGGTGATGCTGCTGCTGACCTGGTTAAAACTGTCGCTTCAGAGGAATATAAATCCTCTAACGATGAAGAAGCAGCTATTTTGGCTGCTTCTAAAGCTGCATCAACTGTTATTGATGCTGCAACTGCAGTTGAAATTTCAAGGAGTTCCATTGGCAACAATACTGTAACAGAGAATGAGAGTGGCAAAGAAACAGAAACTAATGAGGATGTGGAGGAGTACTTCATCCCAGATACTCAATCACTTGCACAGTTGAGGGAAAAGTATTGCATTCAGTGTCTTGAGTTACTTGGAGAATATGTGGAAGTGCTTGGCCCTGTGTTGCATGAGAAGGGGGTTGACGTGTGTCTTGCACTTCTGCAGCAGAATTCTAAACATCGGGAGCCATCCAAGGTTGCTTTGTTGTTGCCTGATGTCATGAAGCTAATCTGTGCTTTGGCTGCACATAGGAAATTTGCTGCACTGTTTGTGGACCGAGGGGGAATGCAAAAGCTTCTTGCTGTCCCTAGAATGGCACAAACTTTCTTTGGTCTTTCTTCTTGTTTATTCACTATTGGTTCTCTTCAGGGTATAATGGAAAGGGTTTGTGCTCTTCCATCGCAAGTTGTTTATCACGTTGTTGAGTTAGCTCTCCAACTTCTTGACTCCAATCAAGACCAAGCCCGGAAAAATGCAGCATTGTTTTTTGCTGCTTCGTTTGTCTTCAGAGCTGTTCTTGATGCCTTTGATTCCCTAGATGGATTACAAAAATTACTGGGCCTTCTAAATGAGGCTGCTTCTGTAAGATCAGGAATAAATTCTGGAGCCTTGAGTTTATCTAACTCAGGATCCCTTCGAAACGATCGATCGTCTGCAGAAGTGCTGACATCATCAGAGAAGCAGATAGCCTATCACACTTCTGTTGCTTTGAGGCAATATTTCAGGGCCCATCTCCTTGTGTTAGTGGATTCCATTCGTCCTAACAAGAGCAATCGTAGTGCTGCTAGAAATATTCCAAGTGTAAGGGCAGTGTACAAGCCCCTTGATATTAGTAATGAGGCAATGGATGGAGTATTCCTACAATTACAAAAAGATCGGAAGCTAGGTCCTGCATTTGTTAGAACACGTTGGCTAGCAGTTGAGAAGTTCTTGGCATATAATGGACATGTTACCATGCTGGAATTGTGTCAGGCCCCACCTGTGGAGCGGTATCTGCATGATTTGCTTCAGTATGCTTTGGGTGTTCTGCACATTGTTACATTGGTACCTAGCAGTCGTAAGATGATCGTAAATGTAACGTTAAGCAACAATCGTGTTGGTATTGCAGTAATTTTGGATGCTGCAAATATAGCTAGTAATCATGTGGACCCCGAGATAATTCAACCAGCATTAAATGTCTTAGTCAATCTTGTTTGCCCTCCACCTTCAATAAGCAATAAACCGGCTATGGTTGCACAAGGGCAGCAGTTGGCATCCTCCCAGACATCCAATGGTCCTCCCTCAGAGGCTAGAGATAGAAATGTTGAACGAAATGTTTCAGATCGTGCTGTTCACTCTACTAGCCAGATTGATCCTAGGGAAAGGAATGGGGACTCCAATGCTATAGATCGAGGCAGTGCTGCCAGCTTAAGTACACAGCCTGTTAGTAGTACACCACAAACTCCTGTTGCTTCTGCCACATCTGGATTGGTTGGCGATCGAAGAATATCTTTGGGTGTGGGAGCAGGTTGTGCTGGCCTTGCTGCACAATTGGAACAAGGATATCGTCAGGCAAGAGAGACTGTCCGATCTAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCTCGGATATATTCACCTCCTGCTGCACTGGACTGTCTTCGTGCTCTAGCATGCCGAGTCCTGCTTGGATTAGCCAGAGATGATACAATTGCACACATATTGACAAAGCTACAGGTTGGGAAAAAGCTGTCAGAACTGATTCGGGATTCTGGTGGCCAAACACTTGGAACGGAGCAGGGTAGGTGGCAAGCTGAACTTTCCCAGGCAGCCATTGAACTTATTGGGATTGTGACCAATTCTGGCCGTGCAAGTACATTAGCTGCTACTGATGCTGCTACTCCTACTTTAAGGCGCATAGAAAGAGCAGCTATTGCTGCTGCTACTCCTATTACTTACCATTCAAGGGAACTTTTGCTTCTAATTCATGAACACCTACAGGCATCTGGGTTACCACAAACTGCTTCTATGTTGCTTAAAGAGGCGCAATTTACTCCTTTGCCATCAGTGATTCCTCCATCTTCTCTTGCCCAACAGCCCGCAACACAGGAAGCTTCTTCAACACAAATTCAGTGGCCCTCTGGTCGTACTCCTTCTGGATTTCTCTCTAACAAATTAAAGTTTAATGCAAAGGATGAGGATGCTGTCTTGAAAAGTGATTCTGTCTCTGCAAAGAAAAAATCACTAACTTTCTCATCATCTTTTCATTCAAGACTCCAACTTTTTGACTCTCAGCAATCATCTGTAAAGAAATTTTCAAATACTGCTAAAGAATCTTCTGAAATTAGTGTAGTAGAGACTGGATCCGAATATTCAGTGAAACATAACATTGATACTGGATCTCAGTTTAAGACTCCAATAACTTTGCCAACAAAACGGAAGTTATCTGATTTGAAGGACATATCAATGTTTTCTTCATCTGGAAAACGGTTAAATGTTGGGGATCAAGGACTCCGCTCTCCTATTTGTTCGAGTGCAATTCGTAAAAGCAGCCTGCAGCCTGATGCAGTTGGATTTTTCACTCCAACTTGTAACCTGAAAAATCAACACACCCGTTGTATGGGTGACTTGGTGGACGAGAATCAGTGCAGTACATCAAATCTAGGTCAGATGACACCATCTTCCCAAGTATTAAACGACCTTCAGCCCAGCAACCCTGAGTGTGTAACATTAGATTCTCTAGTGATTCAGTATTTGAAGCATCAACATCGCCAATGTCCAGCTCCTATTACAACACTTCCTCCGCTGTCACTTCTGCACCCGCATGTCTGTCCTGAACCAAAGCATAGCCTTGATGCCCCTTCTAATGTGACAGCCAGGCTTGGAACTCGCGAGTTTAAATATATGTATGGGGGAGTACATGGGAATCGCAGGGATCGTCAACTTGTTTACAGTCGGTTTAGGCCTTGGCGCACATGTCGGGATGATGCTGGAGCCTTGTTAACATGCATTACATTTGTTGGGGACTCCTCTCATATTGCAGTTGGAAGCCATAATGGGGAGCTTAAATTTTTCGAATCCAACAACAGCAATGTAGTTGAGAGCTTCACAGGTCATCAGGCTCCTTTGACTCTTGTTCAGTCTTTTGTTTCTGGCGAGACCCAGCTATTACTTTCTTCAAGCTCCCAAGATGTTAGGTTGTGGGATGCAACTTCGATTTTAGGTGGTCCTAGTCATTCATTTGAAGGATGCAGGGCAGCCAGGTTTAGCAATTCTGGGAATGTTTTTGCAGCCCTGTCATCAGAATCTTCAAGGCGGGAGATCCTCTTGTATGATATTCAAACATGTCAGTTAGAGTCAAAGTTGTCAGATACATTTGCAACTTCTACAGGGCGAGGTCACGTTTATTCTTTAATCCATTTTAACCCTTCTGACTCAATGCTGCTTTGGAATGGTGTCTTGTGGGATCGTCGTGTCTCTGCGCCTGTTCATCGGTTTGATCAGTTTACAGATTATGGTGGTGGAGGCTTTCATCCTGCTGGCAATGAGGTTATTATAAACTCTGAAGTCTGGGATCTGCGCAAGTTCAGATTGCTACGCAGTGTGCCTTCATTGGATCAAACATCAATAACATTCAATGCGCGTGGTGACGTAATGTATGCCATCTTAAGGAGAAATCTTGAGGATGTAATGTCAGCAGTTCACACACGACGGGTTAAGCATCCTCTTTTTTCAGCTTTCCGCACAGTGGATGCAGTTAATTATTCTGACATTGCAACTATCCCTGTGGATCGCTGTGTTCTTGATTTTGCAACTGAGCCTACAGATTCGTTTGTTGGGCTGATTACTATGGATGATCAGGAGGAGATGTATGCTTCTGCCAGAATCTATGAAATTGGTCGTCGGAGGCCAACCGATGATGATTCTGATCCTGATGATGCTGAAAGTGAGGAGGAAGATGAGGATGATGATGATGATGATGGTGATGTTGATCCTACTTTAGGTCCTGGTCTTGGTGGGGATAGTGGCAGTGATGCTGATATGAGCAATGATGACGAGGAGGACGATAGTGTGAGTGATCTTGATGAAGATGAAGATGGAGATTTTATCTTGGATGATGTAGACTTTGATGGTGGAACTGGCATATTGGAGATTGTGACAGAAGGTGACGAAGATGATGATGATAGTCAGGTACTTGAATCCTTAAGTAGTGATGATGAGGATTTTGTGGGCAATGGCTTTGGTTATTAA 5811 0.439 MEDQANQAPPPHDEDEDSKKEEDELITKVNKLMEKITSAPDNPKATVLHALASILETQESRYMDENGHSSSSTARAAHVIGRLGGLIRENDEFFELISSKFLSETRYSTSIRAAAGRLLLCCSLTWIYPHVFEEPVMENIKNWVMDDNTGMSSEEQNLKQSSGKREASDSEMLKTYSTGLLAVCLVGGGQIVEDVLTSGLSAKLMRYLRLRVLGETSSNQKDVTHITESRHASANTSGRGRDDGRGRFRQILEPNHLDDTRMIDERSLDDATLERGPDRSISGQTLQEGSWMEGKPPDGLGEGVEVQEVDSDGEDRWRYKDTRDGRTKYSEHDDNVRDDSSRRRSNRGWGRSKGKGRVNEGTVESDSILSSPGSGSRFVHGRRDRSVLRNADVRRVADSKKIPGRASLEASGFEREDHDDCFHECRIGNKDITDLVRKAVQAAEAEARSANAPEEAVKAAGDAAADLVKTVASEEYKSSNDEEAAILAASKAASTVIDAATAVEISRSSIGNNTVTENESGKETETNEDVEEYFIPDTQSLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHREPSKVALLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSQVVYHVVELALQLLDSNQDQARKNAALFFAASFVFRAVLDAFDSLDGLQKLLGLLNEAASVRSGINSGALSLSNSGSLRNDRSSAEVLTSSEKQIAYHTSVALRQYFRAHLLVLVDSIRPNKSNRSAARNIPSVRAVYKPLDISNEAMDGVFLQLQKDRKLGPAFVRTRWLAVEKFLAYNGHVTMLELCQAPPVERYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIASNHVDPEIIQPALNVLVNLVCPPPSISNKPAMVAQGQQLASSQTSNGPPSEARDRNVERNVSDRAVHSTSQIDPRERNGDSNAIDRGSAASLSTQPVSSTPQTPVASATSGLVGDRRISLGVGAGCAGLAAQLEQGYRQARETVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGGQTLGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLPQTASMLLKEAQFTPLPSVIPPSSLAQQPATQEASSTQIQWPSGRTPSGFLSNKLKFNAKDEDAVLKSDSVSAKKKSLTFSSSFHSRLQLFDSQQSSVKKFSNTAKESSEISVVETGSEYSVKHNIDTGSQFKTPITLPTKRKLSDLKDISMFSSSGKRLNVGDQGLRSPICSSAIRKSSLQPDAVGFFTPTCNLKNQHTRCMGDLVDENQCSTSNLGQMTPSSQVLNDLQPSNPECVTLDSLVIQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKHSLDAPSNVTARLGTREFKYMYGGVHGNRRDRQLVYSRFRPWRTCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFESNNSNVVESFTGHQAPLTLVQSFVSGETQLLLSSSSQDVRLWDATSILGGPSHSFEGCRAARFSNSGNVFAALSSESSRREILLYDIQTCQLESKLSDTFATSTGRGHVYSLIHFNPSDSMLLWNGVLWDRRVSAPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFSAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQEEMYASARIYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDGDVDPTLGPGLGGDSGSDADMSNDDEEDDSVSDLDEDEDGDFILDDVDFDGGTGILEIVTEGDEDDDDSQVLESLSSDDEDFVGNGFGY* 1937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00487 1936 Gene3D - 1507 1831 IPR015943 GO:0005515
Phac9g00487 1936 MobiDBLite consensus disorder prediction 218 234 - -
Phac9g00487 1936 SUPERFAMILY WD40 repeat-like 1520 1742 IPR036322 GO:0005515
Phac9g00487 1936 MobiDBLite consensus disorder prediction 1816 1936 - -
Phac9g00487 1936 MobiDBLite consensus disorder prediction 1212 1234 - -
Phac9g00487 1936 MobiDBLite consensus disorder prediction 218 380 - -
Phac9g00487 1936 FunFam DDB1-and CUL4-associated factor homolog 1 1504 1831 - -
Phac9g00487 1936 ProSiteProfiles LIS1 homology (LisH) motif profile. 1174 1206 IPR006594 GO:0005515
Phac9g00487 1936 MobiDBLite consensus disorder prediction 933 1013 - -
Phac9g00487 1936 MobiDBLite consensus disorder prediction 987 1012 - -
Phac9g00487 1936 SMART Lish 1174 1206 IPR006594 GO:0005515
Phac9g00487 1936 MobiDBLite consensus disorder prediction 933 954 - -
Phac9g00487 1936 PANTHER VPRBP PROTEIN-RELATED 15 1933 IPR033270 GO:0016567
Phac9g00487 1936 MobiDBLite consensus disorder prediction 1866 1893 - -
Phac9g00487 1936 SMART WD40_4 1506 1546 IPR001680 GO:0005515
Phac9g00487 1936 SMART WD40_4 1549 1589 IPR001680 GO:0005515
Phac9g00487 1936 SMART WD40_4 1594 1632 IPR001680 GO:0005515
Phac9g00487 1936 SUPERFAMILY ARM repeat 561 1113 IPR016024 -
Phac9g00487 1936 MobiDBLite consensus disorder prediction 1906 1922 - -
Phac9g00487 1936 MobiDBLite consensus disorder prediction 1 23 - -
Phac9g00487 1936 MobiDBLite consensus disorder prediction 310 346 - -
Phac9g00487 1936 MobiDBLite consensus disorder prediction 1830 1851 - -
Phac9g00487 1936 MobiDBLite consensus disorder prediction 235 276 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00487 1533 1739 U-box Gene Family AT2G33340 25.446 1.03e-07 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00487 K11789 - gmx:100796030 3068.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00487 9 3158278 3168021 Phac9g00487 9 3158278 3168021 ECH