Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00481 ATGTCGATGTGGTCTCTTGGTAGAAGATGCTCAAGTAGCGAAATGGCCTCCGTTTCAACTGCCATCTTTCCAGCATTTGGCAGCCCCATCTTAAACATAGAAGGTTACTCCAACCTAAGAAAATACGTCATTGCTCCCTATGACCCTGGATATCAATTGTGGCAAACGTTCCTTGTGGCTTTGGTAGTGTACTCTGCATGGGCATCTCCCTTCGAGCTAGCTTTCAGAGAACTGTTAGTTGGGTCGTTGTTGACCGTTGATCTTCTTGTTGATGCCTTCTTTGCAGTTGATATAATCCTTACTTTCTTTGTGGCTTACTTGGATACATCAACTTATCTTCTTTTGCACTTCACCATGGATCTAGCCTCCACTCTGCCAATTGAGCAGATATATCAAATCCTGACGGGCAAGCCAACCAAAAGCGAGGTATTTGGTTTCCTAGTTATGCTAAGACTCTGGCGATTGAGGCGTGTTACGCTATTTGCAGCGCACTTCGCAGGCTGCATGTTTTATTGGTTGGCTGTCCAGCACAAAACACCGAAGAACACATGGATAGGAAACAAAACACAGGATTTTCATGAATTGGGCATCGGGTTGGGTTACACTTATTCTGTGTACTGGTCTGTTGCAACCCTTACCACAGTTGGATATGGAGATTTTTATGCAGTCAATTTAACTGAGAAGCTTTTCTGTATTTTCTACACGCTCTTTAACATCGGCCTCGGTGCATATATTATTGGAAACATGACAACTTTGTTCGTTCATATCTCTGTCCGAACCTTTGCCGTGGCTTCACAGAGGGATGTCTTCGACAAAATATTACAATATGCAAACAAAAATAGACTCCCAGGAGGATTGAAGGAGCAAATATTGGCACACATGCAGTTGAAGTTCAAGACTGCAGAGTTGCAGCAAGAAGTGCTGCAAGACCTACCTAAAACTATAAGATCCTGTATTGCTCAGCATCTTTTCAAAAACATTGTTGAAACAGCATATTTATTTAAAGGAGTTTCTGATTATTTTATCGCCCAGCTGGTGTCAGAAACGAAGGCAGAATACTACCCATCTAGGGTTGACATTATCTTGCAAAATGAGATGCCAAAATATTTTTACATCTTGGTATCTGGGTCACTGGATGTGTTGATATACAATACTGGGTCCGAACAGTTTTTATTCGAACTTGAATCTGGAGACATGGCAGGAGAAATAGGCGTGATGTTTAATATTCCACAACCTTTTACAGTGAGAAGTAGAGGGCTCTCCCAGGTCCTACGAATCAATCATCATGACCTCAAGCAGATGGTGCAACCATTTAGTGACGATGGGAAGGCAATCATGTACAACTTTATTCAGTATTTGAAGGGCCTCAAAGGCAAGGTGCTAGAAGAAATATCGTGTGTAACAGAATTGCTGGGTGACCTTGAGCATCTGACACAAAATGAGGGTACTCTCCATGAAGATTCCAGATATCAAGATCCATATAAAAAAGGGAAAACAGGAAATTACAAACCACTGTCAAGCCCAGTCCCCGTTAGAGTTAAAATCCACGGACACCATCCCAATGAAAACAAAATGGGAAATGGAACAACGCCAAAGCTCATACTTCTCCCAAATTCGGTTGAAGATATTTTCAGAGTTGCAGAGAGAAAATTCGGAAAAAGAGGAAGCAAAATTCTCATGGCTGACGGCTCAGAAGTAGAACAATTAAACGCGCTAAGGGAGAATGATGAGTTATATATCCTCTAA 1746 0.4181 MSMWSLGRRCSSSEMASVSTAIFPAFGSPILNIEGYSNLRKYVIAPYDPGYQLWQTFLVALVVYSAWASPFELAFRELLVGSLLTVDLLVDAFFAVDIILTFFVAYLDTSTYLLLHFTMDLASTLPIEQIYQILTGKPTKSEVFGFLVMLRLWRLRRVTLFAAHFAGCMFYWLAVQHKTPKNTWIGNKTQDFHELGIGLGYTYSVYWSVATLTTVGYGDFYAVNLTEKLFCIFYTLFNIGLGAYIIGNMTTLFVHISVRTFAVASQRDVFDKILQYANKNRLPGGLKEQILAHMQLKFKTAELQQEVLQDLPKTIRSCIAQHLFKNIVETAYLFKGVSDYFIAQLVSETKAEYYPSRVDIILQNEMPKYFYILVSGSLDVLIYNTGSEQFLFELESGDMAGEIGVMFNIPQPFTVRSRGLSQVLRINHHDLKQMVQPFSDDGKAIMYNFIQYLKGLKGKVLEEISCVTELLGDLEHLTQNEGTLHEDSRYQDPYKKGKTGNYKPLSSPVPVRVKIHGHHPNENKMGNGTTPKLILLPNSVEDIFRVAERKFGKRGSKILMADGSEVEQLNALRENDELYIL* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00481 581 Pfam Cyclic nucleotide-binding domain 354 436 IPR000595 -
Phac9g00481 581 SUPERFAMILY cAMP-binding domain-like 267 453 IPR018490 -
Phac9g00481 581 ProSiteProfiles KHA domain profile. 512 581 IPR021789 -
Phac9g00481 581 Gene3D Jelly Rolls 304 465 IPR014710 -
Phac9g00481 581 FunFam Potassium channel KAT2 321 457 - -
Phac9g00481 581 SMART cnmp_10 333 450 IPR000595 -
Phac9g00481 581 Gene3D - 52 159 - -
Phac9g00481 581 Gene3D - 160 257 - -
Phac9g00481 581 ProSiteProfiles cAMP/cGMP binding motif profile. 333 452 IPR000595 -
Phac9g00481 581 Pfam KHA, dimerisation domain of potassium ion channel 512 580 IPR021789 -
Phac9g00481 581 SUPERFAMILY Voltage-gated potassium channels 46 254 - -
Phac9g00481 581 PANTHER POTASSIUM CHANNEL AKT1 15 465 IPR045319 GO:0005249|GO:0006813
Phac9g00481 581 CDD CAP_ED 333 446 IPR000595 -
Phac9g00481 581 Pfam Ion transport protein 159 260 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac9g00481 581 Pfam Ion transport protein 52 158 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00481 Phac-Chr9 3097366 3105176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00481 1 580 Ion Channels AT4G32650 49.048 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00481 K21867 - gmx:100794620 911.753