Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00461 ATGGAAAAAGAAGAGATGGGTGTGGATTACTATGATGTATTGAAGGTTAACAGAAATGCTACGGAGGATGATTTGAAGAAAGCATACAGAAAGTTGGCCATGAAATGGCACCCCGATAAGAACCCCACCAACAAAAAAGAAGCTGAAGCCAATTTCAAACAGATCTCTGAGGCTTATGAGGTGCTGAGTGACCCTCAGAAAAGGGTGGTTTATGATCAGTATGGAGAGGAAGGGTTGAAAGATAGGCCACCTGATGAACCATCAAATGGGTTCAACCCCAGAAATGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGATCATCTGGGCCAGGGAAGTCCAAGAGATTCCCCTCTGATGGAGGATTTAGTGGATTTAGTGCAAATGATAATAATTTTCGATCATATAGTACTGGACGGGGGAATGTGCTAAAGAAGCCACTACCTGTGGAATCCAAACTGCCTTGCTCTTTGGAGGAATTGTACTCTGGATCTACAAGGAAAATGAAGATCTCAAGGAACACCGTGGATGCTCACGGATGGACAGTTCCGGAAACAGAGATATTAACCATTGATGTGAAGCCGGGTTGGAAGAAAGGGACAAAGATTACGTTCCCTGAGAAAGGGAATCAACAACCAAACCAACTGGCAGCAGACCTTGTGTTTGTGATTGACGAGAAGCCTCATGATGTGTTCAAGAGAGACGGGAATGACCTTATTGTGAACAAAAGGGTATCATTGGCTGAGGCCATTGGAGGAACCACAATAAACCTCACAACACTTGATGGACGTACTTTAAATGTTCCAGTGAGTGACATTGTGAGTCCTGGTTACGAGATGAATGTTGCAAAAGAAGGGATGCCAATAACAAAGGAGCCTGGTCATAGGGGTGATTTGAGGATCAAATTTGATGTCAGTTTTCCAACAAAGTTGACCCCAGAGCAACGAGCAGGACTCAAGCGAGCACTCACAACTTGA 993 0.4391 MEKEEMGVDYYDVLKVNRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKQISEAYEVLSDPQKRVVYDQYGEEGLKDRPPDEPSNGFNPRNAEDIFAEFFGSSPFGFGSSGPGKSKRFPSDGGFSGFSANDNNFRSYSTGRGNVLKKPLPVESKLPCSLEELYSGSTRKMKISRNTVDAHGWTVPETEILTIDVKPGWKKGTKITFPEKGNQQPNQLAADLVFVIDEKPHDVFKRDGNDLIVNKRVSLAEAIGGTTINLTTLDGRTLNVPVSDIVSPGYEMNVAKEGMPITKEPGHRGDLRIKFDVSFPTKLTPEQRAGLKRALTT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00461 330 SUPERFAMILY HSP40/DnaJ peptide-binding domain 155 235 IPR008971 GO:0006457|GO:0051082
Phac9g00461 330 SUPERFAMILY Chaperone J-domain 8 113 IPR036869 -
Phac9g00461 330 SMART dnaj_3 8 67 IPR001623 -
Phac9g00461 330 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Phac9g00461 330 Gene3D - 233 330 - -
Phac9g00461 330 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 6 328 - -
Phac9g00461 330 ProSiteProfiles dnaJ domain profile. 9 75 IPR001623 -
Phac9g00461 330 Pfam DnaJ domain 9 72 IPR001623 -
Phac9g00461 330 Pfam DnaJ C terminal domain 155 313 IPR002939 -
Phac9g00461 330 PRINTS DnaJ domain signature 47 67 IPR001623 -
Phac9g00461 330 PRINTS DnaJ domain signature 67 86 IPR001623 -
Phac9g00461 330 PRINTS DnaJ domain signature 11 29 IPR001623 -
Phac9g00461 330 PRINTS DnaJ domain signature 29 44 IPR001623 -
Phac9g00461 330 Gene3D - 154 232 - -
Phac9g00461 330 SUPERFAMILY HSP40/DnaJ peptide-binding domain 236 322 IPR008971 GO:0006457|GO:0051082
Phac9g00461 330 Gene3D DnaJ domain 8 114 IPR036869 -
Phac9g00461 330 MobiDBLite consensus disorder prediction 75 94 - -
Phac9g00461 330 FunFam DNAJ heat shock family protein 233 328 - -
Phac9g00461 330 FunFam Dnaj homolog subfamily b member 151 232 - -
Phac9g00461 330 CDD DnaJ 9 64 IPR001623 -
Phac9g00461 330 CDD DnaJ_C 155 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00461 Phac-Chr9 2941626 2943988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00461 10 74 C2H2 Transcription Factor Family AT1G74250 39.130 1.67e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00461 K09510 - gmx:100796426 546.199