Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00457 ATGGATAAAGTAAATAAGACGTGTGCCAAAGATGAAGAACGTTCAATCCGAGTCACCAGAGCAAAGACTAGAGCCTTGAGAGGAATTCCTCCCCGTTCAAGACCTTCCTCTAAAAATGAACAGAAAAACATGCCTCGAGCAAATTCCAAAAGAGCAGCCACTTCTGAAGACCAAACTTCTCTGGTTGTTCCTGCTCTTATTCAAAATAAGAGAAGGGCAGTTCTTACAGATGTAACAAATGTTTGCACAAAATCACTTGATAAGTGTACTGAGGCATCAAAATTTACGGCCAAAGGAGTTTATACAAAGAAAAGCACAAAACTAGCTTCAGGTGTTTCCTCTGAAGTCTCATCAACACAAGAGAATGTTGGAGCAAAGTTAGCTGAAGATTTATCAACAATAAGGATGGTAGAATCCATTGACACCATAAGTGAACGTGTTATACCATGCACCAAGCCGTCAATGCAAGATTCTGTGAAATCTGATGAACATCTGAGCTCTTCAAAAAATGGTTTTTCCATGATCTCAACTGCTACTAACTTTAAGCAACAGAATTTAGATATAGATGTGATTTCTGAGAAGCCAATAACCTCAAACTCCCTTGCTATAGTGGACATTGATTCAGAGTTAAAGGATCCTCAAATTTGGAGTTGTTATGCCTCTGACATGTACAATAACATTCGAGTCACAGAGCTTAAAAGGAAAACATTGACTAACTACATGGAGAAGTTGCAGACAGATATTAATCCAAGTATGCGTGGCATTCTGGTGGATTGGCTTGTGGAGGTTTCTGAGGAATACAGATTGGTTCCAGACGCTCTTTACCTGACAGTGAACCTCATTGATCGGTATCTCTCAACTAAATTCATTCAGAAGCAAAGGCTACAGTTGCTGGGTGTTACTAGCATGCTGATTGCATCAAAGTACGAAGAGATGTGCCCACCTCGAGTGGAAGAATTTTGCTTCATCACAGATAACACATACACAAAAGAAGAGGTACTGAAAATGGAGAGAGAAATACTGAATGTGATGCATTTTCAGCTATCTGTTCCCACAATCAAAACATTTCTGAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGCTCCTTGTGTTGAACTGGAATTCTTGGCAAATTATTTAGCTGAGCTTGCTCTTGTTGAATATAGCTTCTTCCAGTTTCTTCCTTCTCTTGTAGCTGCATCTGCTGTGTTCCTTGCCAGATGGACCCTGAACGATTCAGAACATCCATGGAATCCAACTTTGGAGCACTATGCAAACTACAAAGCTTCAGAGCTCAAAACTGTTGTTCTTGCACTGCAAGATCTGCAACTTAATTCCAAAGGCTGTCCCCTCAATGCTGTCCGTGATAAGTATAAACTACAGAAGTTCAATTGTGTGGCAAACTTGTCTCCAAAACCGGTACAGTCACTCTTCGAGGCCCAAGTGTAA 1455 0.4048 MDKVNKTCAKDEERSIRVTRAKTRALRGIPPRSRPSSKNEQKNMPRANSKRAATSEDQTSLVVPALIQNKRRAVLTDVTNVCTKSLDKCTEASKFTAKGVYTKKSTKLASGVSSEVSSTQENVGAKLAEDLSTIRMVESIDTISERVIPCTKPSMQDSVKSDEHLSSSKNGFSMISTATNFKQQNLDIDVISEKPITSNSLAIVDIDSELKDPQIWSCYASDMYNNIRVTELKRKTLTNYMEKLQTDINPSMRGILVDWLVEVSEEYRLVPDALYLTVNLIDRYLSTKFIQKQRLQLLGVTSMLIASKYEEMCPPRVEEFCFITDNTYTKEEVLKMEREILNVMHFQLSVPTIKTFLRRFIQAAQSSYKAPCVELEFLANYLAELALVEYSFFQFLPSLVAASAVFLARWTLNDSEHPWNPTLEHYANYKASELKTVVLALQDLQLNSKGCPLNAVRDKYKLQKFNCVANLSPKPVQSLFEAQV* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00457 484 SMART Cyclin_C_2 351 474 IPR004367 -
Phac9g00457 484 MobiDBLite consensus disorder prediction 1 20 - -
Phac9g00457 484 MobiDBLite consensus disorder prediction 34 58 - -
Phac9g00457 484 SUPERFAMILY Cyclin-like 211 348 IPR036915 -
Phac9g00457 484 CDD CYCLIN_AtCycA_like_rpt1 212 347 - -
Phac9g00457 484 PIRSF Cyclin_A_B_D_E 29 483 IPR046965 GO:0016538|GO:0044772
Phac9g00457 484 Gene3D - 236 349 - -
Phac9g00457 484 PANTHER CYCLINS 170 462 IPR039361 -
Phac9g00457 484 FunFam Cyclin A1 338 470 - -
Phac9g00457 484 Pfam Cyclin, N-terminal domain 222 349 IPR006671 -
Phac9g00457 484 ProSitePatterns Cyclins signature. 253 284 IPR006671 -
Phac9g00457 484 Gene3D - 222 470 - -
Phac9g00457 484 SMART cyclin_7 258 342 IPR013763 -
Phac9g00457 484 SMART cyclin_7 355 443 IPR013763 -
Phac9g00457 484 MobiDBLite consensus disorder prediction 1 58 - -
Phac9g00457 484 Pfam Cyclin, C-terminal domain 351 473 IPR004367 -
Phac9g00457 484 CDD CYCLIN_AtCycA-like_rpt2 351 465 - -
Phac9g00457 484 FunFam Mitotic cyclin 6 236 336 - -
Phac9g00457 484 SUPERFAMILY Cyclin-like 350 473 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00457 Phac-Chr9 2910707 2916628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00457 7 480 Core Cell Cycle Gene Families AT5G25380 47.379 8.87e-146 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00457 K06627 - gmx:547780 707.212