Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00456 ATGGATAAAGTAAATAAGACGTGTGCCAAAGATGAAGAACGTTCAATCCGAGTCACCAGAGCAAAGACTAGAGCCTTGAGAGGAATTCCTCCCCGTTCAAGACCTTCCTCTAAAAATGAACAGAAAAACATGCCTCGAGCAAATTCCAAAAGAGCAGCCACTTCTGAAGACCAAACTTCTCTGGTTGTTCCTGCTCTTATTCAAAATAAGAGAAGGGCAGTTCTTACAGATGTAACAAATGTTTGCACAAAATCACTTGATAAGTGTACTGAGGCATCAAAATTTACGGCCAAAGGAGTTTATACAAAGAAAAGCACAAAACTAGCTTCAGGTGTTTCCTCTGAAGTCTCATCAACACAAGAGAATGTTGGAGCAAAGTTAGCTGAAGATTTATCAACAATAAGGATGGTAGAATCCATTGACACCATAAGTGAACGTGTTATACCATGCACCAAGCCGTCAATGCAAGATTCTGTGAAATCTGATGAACATCTGAGCTCTTCAAAAAATGATATAGATGTGATTTCTGAGAAGCCAATAACCTCAAACTCCCTTGCTATAGTGGACATTGATTCAGAGTTAAAGGATCCTCAAATTTGGAGTTGTTATGCCTCTGACATGTACAATAACATTCGAGTCACAGAGCTTAAAAGGAAAACATTGACTAACTACATGGAGAAGTTGCAGACAGATATTAATCCAAGTATGCGTGGCATTCTGGTGGATTGGCTTGTGGAGGTTTCTGAGGAATACAGATTGGTTCCAGACGCTCTTTACCTGACAGTGAACCTCATTGATCGGTATCTCTCAACTAAATTCATTCAGAAGCAAAGGCTACAGTTGCTGGGTGTTACTAGCATGCTGATTGCATCAAAGTACGAAGAGATGTGCCCACCTCGAGTGGAAGAATTTTGCTTCATCACAGATAACACATACACAAAAGAAGAGGTACTGAAAATGGAGAGAGAAATACTGAATGTGATGCATTTTCAGCTATCTGTTCCCACAATCAAAACATTTCTGAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGCTCCTTGTGTTGAACTGGAATTCTTGGCAAATTATTTAGCTGAGCTTGCTCTTGTTGAATATAGCTTCTTCCAGTTTCTTCCTTCTCTTGTAGCTGCATCTGCTGTGTTCCTTGCCAGATGGACCCTGAACGATTCAGAACATCCATGGAATCCAACTTTGGAGCACTATGCAAACTACAAAGCTTCAGAGCTCAAAACTGTTGTTCTTGCACTGCAAGATCTGCAACTTAATTCCAAAGGCTGTCCCCTCAATGCTGTCCGTGATAAGTATAAACTACAGAAGTTCAATTGTGTGGCAAACTTGTCTCCAAAACCGGTACAGTCACTCTTCGAGGCCCAAGTGTAA 1407 0.4072 MDKVNKTCAKDEERSIRVTRAKTRALRGIPPRSRPSSKNEQKNMPRANSKRAATSEDQTSLVVPALIQNKRRAVLTDVTNVCTKSLDKCTEASKFTAKGVYTKKSTKLASGVSSEVSSTQENVGAKLAEDLSTIRMVESIDTISERVIPCTKPSMQDSVKSDEHLSSSKNDIDVISEKPITSNSLAIVDIDSELKDPQIWSCYASDMYNNIRVTELKRKTLTNYMEKLQTDINPSMRGILVDWLVEVSEEYRLVPDALYLTVNLIDRYLSTKFIQKQRLQLLGVTSMLIASKYEEMCPPRVEEFCFITDNTYTKEEVLKMEREILNVMHFQLSVPTIKTFLRRFIQAAQSSYKAPCVELEFLANYLAELALVEYSFFQFLPSLVAASAVFLARWTLNDSEHPWNPTLEHYANYKASELKTVVLALQDLQLNSKGCPLNAVRDKYKLQKFNCVANLSPKPVQSLFEAQV* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00456 468 Gene3D - 220 333 - -
Phac9g00456 468 MobiDBLite consensus disorder prediction 1 20 - -
Phac9g00456 468 MobiDBLite consensus disorder prediction 34 58 - -
Phac9g00456 468 Pfam Cyclin, N-terminal domain 206 333 IPR006671 -
Phac9g00456 468 SUPERFAMILY Cyclin-like 334 457 IPR036915 -
Phac9g00456 468 Coils Coil 464 468 - -
Phac9g00456 468 SMART Cyclin_C_2 335 458 IPR004367 -
Phac9g00456 468 PIRSF Cyclin_A_B_D_E 3 467 IPR046965 GO:0016538|GO:0044772
Phac9g00456 468 MobiDBLite consensus disorder prediction 1 58 - -
Phac9g00456 468 SUPERFAMILY Cyclin-like 195 332 IPR036915 -
Phac9g00456 468 PANTHER CYCLINS 163 446 IPR039361 -
Phac9g00456 468 Pfam Cyclin, C-terminal domain 335 457 IPR004367 -
Phac9g00456 468 FunFam Mitotic cyclin 6 220 320 - -
Phac9g00456 468 CDD CYCLIN_AtCycA-like_rpt2 335 449 - -
Phac9g00456 468 FunFam Cyclin A1 322 454 - -
Phac9g00456 468 SMART cyclin_7 242 326 IPR013763 -
Phac9g00456 468 SMART cyclin_7 339 427 IPR013763 -
Phac9g00456 468 Gene3D - 206 454 - -
Phac9g00456 468 ProSitePatterns Cyclins signature. 237 268 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00456 Phac-Chr9 2910707 2916628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00456 7 464 Core Cell Cycle Gene Families AT5G25380 49.673 1.29e-148 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00456 K06627 - gmx:547780 716.072